Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC244098.2-201ENST00000422068 99 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 ATP5F1P1-201ENST00000433775 569 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RPL23AP22-201ENST00000437556 453 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 CR769776.1-201ENST00000441254 787 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL591503.2-201ENST00000442314 1005 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RPL39P6-201ENST00000448289 150 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 HMGN2P7-201ENST00000456186 273 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 BTF3P5-201ENST00000457252 467 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC108729.1-201ENST00000487812 947 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC078817.1-201ENST00000492623 435 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC011602.1-201ENST00000546484 331 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 MTND4P33-201ENST00000556706 766 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 CKS1BP3-201ENST00000600888 237 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL031985.2-201ENST00000600955 480 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 DPRXP5-201ENST00000604662 539 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC009464.1-201ENST00000615731 469 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 U6.101-201ENST00000637707 76 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 PWAR6-201ENST00000552334 4618 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 NUP58P1-201ENST00000502546 1738 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-989P-201ENST00000362756 107 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 SNORA70.4-201ENST00000365509 134 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AP002088.1-201ENST00000382740 395 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MIR513B-201ENST00000385136 84 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP31-201ENST00000411144 127 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 ELOCP9-201ENST00000418624 239 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MTND2P20-201ENST00000440805 661 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 Z75741.1-201ENST00000446793 314 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RPL21P134-201ENST00000453468 483 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RPS20P24-201ENST00000457473 361 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 SNORD11.1-201ENST00000459482 85 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MTND1P16-201ENST00000465177 898 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RPL32P34-201ENST00000486380 400 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC116353.3-201ENST00000511215 249 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC109445.1-201ENST00000512356 383 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 TRAV37-201ENST00000553906 342 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 OR4K7P-201ENST00000580232 945 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 BNIP3P24-201ENST00000593398 557 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC091057.2-201ENST00000602594 792 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC069304.2-201ENST00000605154 435 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC131235.4-201ENST00000609288 620 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MIR7112-201ENST00000616126 65 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC006963.1-201ENST00000624003 1052 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AC138649.5-201ENST00000637456 137 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MTND2P41-201ENST00000637599 773 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 MIR1322-201ENST00000638013 71 ntBASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 AL353746.1-201ENST00000566293 6881 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms