Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TMEM248P1-201ENST00000510579 951 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 FABP5P12-201ENST00000515543 389 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 MIR2682-201ENST00000580305 110 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC093424.1-201ENST00000604999 338 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC107952.2-201ENST00000606048 486 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC080013.3-201ENST00000606839 578 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL513477.2-201ENST00000607858 568 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 uc_338.1-201ENST00000612113 180 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC109809.1-201ENST00000619665 545 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC110801.1-201ENST00000623590 212 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC066616.2-201ENST00000559334 1481 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 CDR1-202ENST00000625883 1485 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 SEPT7P7-201ENST00000420492 1301 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AF127577.6-201ENST00000623352 2191 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC130650.2-201ENST00000618736 2403 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 ZNF833P-201ENST00000424938 1494 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 RNVU1-3-201ENST00000364313 161 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 MIR184-201ENST00000384962 84 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 HMGB1P49-201ENST00000418882 569 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC012065.2-201ENST00000421295 375 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 XKRYP1-201ENST00000423438 492 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 USP9YP11-201ENST00000427537 717 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 XKRYP2-201ENST00000432915 492 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL353705.1-201ENST00000433468 480 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 VN1R10P-201ENST00000447106 875 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC109925.1-201ENST00000478069 331 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC021205.2-201ENST00000480069 347 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 RPL7P47-201ENST00000497299 556 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 RN7SKP287-201ENST00000516546 266 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 MTCO2P15-201ENST00000532655 656 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC010198.2-201ENST00000550612 259 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL389895.1-201ENST00000554127 252 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC005000.2-201ENST00000605468 310 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AL157817.1-201ENST00000614264 790 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC008083.4-201ENST00000615076 444 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC079395.3-201ENST00000615161 484 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AP002782.1-201ENST00000623107 614 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC048347.1-201ENST00000624621 427 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 AC120349.2-201ENST00000625002 298 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 SAGE4P-201ENST00000442271 3381 ntBASIC3.63□□□□□ -1.83
CCDC60Q8IWA6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 MIR30E-201ENST00000362104 92 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 MIR23A-201ENST00000385245 73 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 SNORA48.2-201ENST00000390926 124 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RN7SKP285-201ENST00000410137 318 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RNU4-47P-201ENST00000410876 114 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC068533.2-201ENST00000411872 306 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RPL31P2-201ENST00000413849 377 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AL008987.1-201ENST00000415528 237 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 RPL22P18-201ENST00000417197 377 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC005517.2-201ENST00000424673 553 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC127537.2-201ENST00000439258 465 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 CEACAMP4-201ENST00000457676 421 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC006445.1-201ENST00000491925 405 ntBASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC60Q8IWA6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms