Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 uc_338.9-201ENST00000617424 182 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL603758.1-201ENST00000618654 241 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC008121.3-201ENST00000618726 433 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AP005019.3-201ENST00000620418 560 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 TPTEP1-208ENST00000636884 213 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 MIR1302-1-201ENST00000637932 143 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VRK3Q8IV63 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VRK3Q8IV63 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VRK3Q8IV63 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 RNU5E-1-201ENST00000362477 120 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RNU1-20P-201ENST00000363314 162 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RNU4-1-201ENST00000363925 141 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 SNORA63C-201ENST00000364578 129 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 Y_RNA.381-201ENST00000365666 102 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 Y_RNA.474-201ENST00000384341 102 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VRK3Q8IV63 RN7SKP140-201ENST00000411196 284 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RPS20P14-201ENST00000412545 360 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 VN1R36P-201ENST00000414936 291 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 NCOR1P3-201ENST00000420479 303 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 SRIP2-201ENST00000428470 166 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC010881.1-201ENST00000433830 235 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RPL7P12-201ENST00000446719 750 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 DHFRP3-201ENST00000455595 559 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 RPS23P1-201ENST00000491662 432 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC103851.1-201ENST00000506833 274 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 PCBP2P3-201ENST00000509726 843 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RNU6-488P-201ENST00000515918 99 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 RN7SKP13-201ENST00000515933 244 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 IGLVIV-65-201ENST00000517313 360 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 TRMT10BP1-201ENST00000519377 943 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC090312.1-201ENST00000580637 348 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 SNORD39.3-201ENST00000584451 71 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC074140.1-201ENST00000621617 208 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VRK3Q8IV63 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 AP002907.1-201ENST00000606361 1430 ntBASIC4.34□□□□□ -1.71
VRK3Q8IV63 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VRK3Q8IV63 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VRK3Q8IV63 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
VRK3Q8IV63 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VRK3Q8IV63 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
VRK3Q8IV63 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VRK3Q8IV63 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.34□□□□□ -1.72
VRK3Q8IV63 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VRK3Q8IV63 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.34□□□□□ -1.72
VRK3Q8IV63 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC139713.2-214ENST00000642059 1811 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 RPL23AP57-201ENST00000332361 466 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 RPL7P26-201ENST00000333817 754 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 SNORA56-201ENST00000383966 129 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 RNU6-510P-201ENST00000391239 108 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 MRPL42P2-201ENST00000403169 426 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 BTBD10P2-201ENST00000404779 676 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AL162578.1-201ENST00000406202 378 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AL592293.2-201ENST00000422292 996 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 RPL23AP25-201ENST00000430973 463 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 HMGN3P1-201ENST00000453847 193 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC026427.2-201ENST00000506228 536 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC108471.1-201ENST00000513977 287 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 RNA5SP497-201ENST00000516081 97 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 RNA5SP228-201ENST00000516232 133 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 Y_RNA.691-201ENST00000516611 103 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 SNORD60.2-201ENST00000516883 86 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms