Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71Q8IV32 MTND5P3-201ENST00000438536 1800 ntBASIC3.28□□□□□ -1.88
CCDC71Q8IV32 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71Q8IV32 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 SNORD113-6-201ENST00000363345 75 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 ARF4P3-201ENST00000397387 509 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 U3.39-201ENST00000408569 239 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC017079.2-201ENST00000416102 485 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 BX842559.1-201ENST00000419615 532 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 RPS4XP10-201ENST00000465034 731 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC087312.1-201ENST00000471411 480 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 OR4G11P-201ENST00000492842 939 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 HSPD1P15-201ENST00000505573 1122 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC104090.1-201ENST00000506341 1171 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC118282.1-201ENST00000506408 765 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC112673.1-201ENST00000513168 575 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 RNU6-579P-201ENST00000516879 102 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 IGKV2D-36-201ENST00000518643 226 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 OR6C73P-201ENST00000546432 358 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC008127.2-201ENST00000549925 1075 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL845331.3-202ENST00000562856 261 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 MIR5195-201ENST00000583555 115 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL354976.1-201ENST00000613843 387 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC079395.3-201ENST00000615161 484 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC092650.2-201ENST00000619984 902 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC116618.1-201ENST00000634617 774 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL513302.2-201ENST00000562313 1842 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC005539.1-201ENST00000443768 1479 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AL390862.1-201ENST00000635467 1469 ntBASIC3.27□□□□□ -1.89
CCDC71Q8IV32 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71Q8IV32 AC093908.1-201ENST00000623125 8092 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 FAM133CP-201ENST00000332869 704 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 RNU6-157P-201ENST00000383957 107 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC016769.3-201ENST00000396562 315 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 TAF9BP1-201ENST00000396646 746 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC119751.3-201ENST00000399720 670 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL008987.1-201ENST00000415528 237 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC097713.2-201ENST00000430199 356 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC092427.1-201ENST00000439177 601 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 RPL39P6-201ENST00000448289 150 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 SNORD105B-201ENST00000458770 79 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 MTND1P16-201ENST00000465177 898 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 RPL7P18-201ENST00000478965 734 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 RPL5P23-201ENST00000496040 868 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 SETP14-201ENST00000497538 873 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 OR5H5P-201ENST00000503164 928 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC010265.1-201ENST00000513509 211 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AP004242.1-201ENST00000533701 349 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 DUXAP6-201ENST00000553858 601 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC009712.1-201ENST00000564938 316 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL031985.2-201ENST00000600955 480 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AL355812.1-201ENST00000603215 216 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC006077.1-201ENST00000604746 343 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC021755.4-201ENST00000616620 456 ntBASIC3.26□□□□□ -1.89
CCDC71Q8IV32 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71Q8IV32 AC009318.4-201ENST00000620496 486 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms