Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 SNORA4.1-201ENST00000364263 144 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 RNU6-83P-201ENST00000384568 112 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 MTCO1P39-201ENST00000426148 480 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC091286.1-201ENST00000431233 461 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 USP9YP10-201ENST00000454868 628 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 RPL31P50-201ENST00000471002 296 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 USP9YP5-201ENST00000511770 630 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC105914.1-201ENST00000511798 226 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC093677.1-201ENST00000514414 678 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC110760.3-202ENST00000515177 371 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 RNU1-61P-201ENST00000516107 151 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC103783.1-201ENST00000520506 373 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AP001804.3-201ENST00000525146 880 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 MTCO2P15-201ENST00000532655 656 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC087465.1-201ENST00000560574 245 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC006254.3-201ENST00000603353 884 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AL365503.1-201ENST00000605247 905 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 AL445264.1-201ENST00000621719 171 ntBASIC3.8□□□□□ -1.8
PRPF39Q86UA1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
PRPF39Q86UA1 CEP170P1-201ENST00000502249 4587 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 MTND4P34-201ENST00000572715 1371 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AL161781.1-201ENST00000354277 403 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 SNORD46.1-201ENST00000364139 104 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 RNU6-882P-201ENST00000391025 103 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 RPL7P60-201ENST00000397636 735 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AL008987.1-201ENST00000415528 237 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 CCDC58P2-201ENST00000417131 366 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 SSXP9-201ENST00000417503 292 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 MTND5P14-201ENST00000441481 1267 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC017015.1-201ENST00000477387 286 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 VN1R104P-201ENST00000505115 1009 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 RN7SKP18-201ENST00000516005 275 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC007991.1-201ENST00000522680 631 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC239860.2-201ENST00000525886 270 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC011451.2-201ENST00000604303 598 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 VIS1.1-201ENST00000610517 203 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 TUSC7.1-201ENST00000610969 165 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 AC092106.3-201ENST00000611308 722 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF39Q86UA1 PRO1804-201ENST00000623780 2050 ntBASIC3.79□□□□□ -1.8
PRPF39Q86UA1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF39Q86UA1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms