Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 MIR133B-201ENST00000362210 119 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RNA5SP319-201ENST00000362768 119 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RNU1-19P-201ENST00000363306 165 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.562-201ENST00000384695 113 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RNU1-77P-201ENST00000390868 162 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RNA5SP219-201ENST00000390940 113 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AL133388.1-201ENST00000404509 287 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC243428.1-201ENST00000421099 264 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RN7SL51P-201ENST00000468230 285 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AP000893.1-201ENST00000474462 794 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC008953.1-201ENST00000497334 318 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC009901.1-201ENST00000506703 541 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 FTH1P21-201ENST00000512179 511 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 EIF3KP3-201ENST00000514461 639 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RNU1-54P-201ENST00000517181 120 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 SNORA81.3-201ENST00000517283 198 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 CYCSP28-201ENST00000534284 321 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 MIR3133-201ENST00000583157 78 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC104687.2-201ENST00000604442 342 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AC103705.1-201ENST00000619013 241 ntBASIC4.87□□□□□ -1.63
ATG4DQ86TL0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4DQ86TL0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 MTND5P6-201ENST00000422338 1798 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC011460.1-201ENST00000636268 1834 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RNU6-179P-201ENST00000363350 107 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RNU6-806P-201ENST00000365147 105 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 SNORD115-7-201ENST00000365306 82 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 OR1L6-202ENST00000373684 1044 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.462-201ENST00000384268 102 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.785-201ENST00000384290 109 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 GSTM3P2-201ENST00000412746 530 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 HIGD1AP11-201ENST00000438361 280 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 PCMTD1P1-201ENST00000455560 355 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RPL7P5-201ENST00000471472 736 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 MED28P2-201ENST00000475771 317 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 RN7SL799P-201ENST00000475891 298 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC021146.3-201ENST00000511911 260 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC098976.1-201ENST00000513014 541 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.715-201ENST00000517082 110 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 OR7E18P-201ENST00000592589 702 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC006254.3-201ENST00000603353 884 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC020910.3-201ENST00000603701 874 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AL357559.1-201ENST00000622228 274 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms