Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HSPA8P1-201ENST00000425843 1833 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 RNU1-70P-201ENST00000362618 164 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 RNU6-1243P-201ENST00000364028 107 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AL031121.1-201ENST00000406553 254 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC007390.1-201ENST00000415722 356 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 NUP35P2-201ENST00000416748 943 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC099677.1-201ENST00000420575 175 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC006989.1-201ENST00000427212 131 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC092427.1-201ENST00000439177 601 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AL590399.6-201ENST00000446396 307 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC005410.1-202ENST00000460347 485 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC010486.2-201ENST00000505572 483 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CR383656.7-201ENST00000548164 174 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 DUXAP1-201ENST00000556632 463 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC087465.1-201ENST00000560574 245 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AC124312.4-201ENST00000605533 310 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AP003117.2-201ENST00000606010 545 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 AL031667.3-201ENST00000620124 655 ntBASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RAI1Q7Z5J4 SNORA38.1-201ENST00000364172 131 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RNU6-115P-201ENST00000364310 107 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RPS3AP26-201ENST00000398259 784 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 MIR1289-1-201ENST00000408836 144 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 FGF7P5-201ENST00000441829 291 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 NDUFS5P3-201ENST00000450668 321 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 USP9YP10-201ENST00000454868 628 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 TRBV26-201ENST00000456572 344 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 HMGB3P30-201ENST00000457863 606 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RPL21P103-201ENST00000479921 488 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RPL31P13-201ENST00000484151 370 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 USP9YP5-201ENST00000511770 630 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC023141.12-201ENST00000512399 199 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RNA5SP341-201ENST00000516261 117 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 OR5AK1P-201ENST00000524837 922 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AP000926.4-201ENST00000527351 454 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AL121766.1-201ENST00000547436 487 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 SNRPGP15-201ENST00000600149 222 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 BBIP1P1-201ENST00000602999 279 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AL513302.2-201ENST00000562313 1842 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 Z83843.1-201ENST00000604070 3685 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 MIR30E-201ENST00000362104 92 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RPL23AP47-201ENST00000408017 460 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 BX842559.1-201ENST00000419615 532 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 AL138785.1-201ENST00000425821 331 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 RPL23AP69-201ENST00000431134 458 ntBASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
RAI1Q7Z5J4 COX7BP2-201ENST00000437976 242 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms