Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC119751.1-201ENST00000513357 765 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AP001207.2-201ENST00000519490 539 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC124293.1-201ENST00000530034 493 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC234778.2-201ENST00000566241 354 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC008507.1-201ENST00000587506 734 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 BDH2P1-201ENST00000602288 736 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC027449.1-201ENST00000608890 407 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP3Q7Z494 MTND5P3-201ENST00000438536 1800 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC111188.2-201ENST00000529697 1387 ntBASIC3.98□□□□□ -1.77
NPHP3Q7Z494 AC008725.1-201ENST00000605123 2263 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC106754.1-201ENST00000562632 1513 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AL355379.1-201ENST00000405542 640 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC073264.1-201ENST00000411508 416 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AL592148.1-201ENST00000413568 445 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 BMS1P22-201ENST00000414726 313 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 ZYG11AP1-201ENST00000430329 837 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC010881.1-201ENST00000433830 235 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 NIPA2P5-201ENST00000452282 464 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 Y_RNA.638-201ENST00000459374 113 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AP000873.1-201ENST00000463987 400 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC087879.1-201ENST00000474343 374 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 FABP5P12-201ENST00000515543 389 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 HIGD1AP6-201ENST00000521833 279 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 NDUFS5P6-201ENST00000529136 295 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 OR6C73P-201ENST00000546432 358 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC007566.2-201ENST00000603642 413 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC007318.2-201ENST00000620999 243 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC073476.4-201ENST00000628409 72 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP3Q7Z494 AC007496.3-201ENST00000624987 3443 ntBASIC3.97□□□□□ -1.77
NPHP3Q7Z494 XIAPP3-201ENST00000312918 795 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL009174.1-201ENST00000426577 416 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 MTCYBP15-201ENST00000433123 1127 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 MTCO1P53-201ENST00000441633 699 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL592437.1-201ENST00000443781 492 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC112653.1-201ENST00000443851 386 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 RPS3P1-201ENST00000456781 192 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC008837.1-201ENST00000511513 412 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 RNU6-1028P-201ENST00000517164 93 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC004217.3-201ENST00000551552 878 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL049838.1-201ENST00000563647 981 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.96□□□□□ -1.77
NPHP3Q7Z494 RPAP2P1-201ENST00000603626 1168 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL365400.2-201ENST00000605604 902 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 VN1R74P-201ENST00000613259 503 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL050303.3-201ENST00000613704 284 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AC004943.3-201ENST00000624116 600 ntBASIC3.96□□□□□ -1.77
NPHP3Q7Z494 AL355596.1-201ENST00000565399 3996 ntBASIC3.96□□□□□ -1.78
NPHP3Q7Z494 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 ELL2P4-201ENST00000446870 1376 ntBASIC3.96□□□□□ -1.78
NPHP3Q7Z494 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NPHP3Q7Z494 SNORA72.3-201ENST00000365074 132 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RNU6-444P-201ENST00000383988 108 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms