Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RNA5SP307-201ENST00000362863 116 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-181P-201ENST00000363225 107 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 Y_RNA.453-201ENST00000384223 109 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-339P-201ENST00000384310 107 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 U3.20-201ENST00000390909 217 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 BX510359.2-201ENST00000417920 305 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 MTCYBP24-201ENST00000420387 1106 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ELOCP14-201ENST00000428070 331 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 EZH2P1-201ENST00000431167 291 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL627308.1-201ENST00000435693 821 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC016831.4-201ENST00000438302 307 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ELOCP7-201ENST00000439968 331 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 USP9YP15-201ENST00000442391 422 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC112653.1-201ENST00000443851 386 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 WASF1P1-201ENST00000447560 1131 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC132479.1-201ENST00000449160 144 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL353691.1-201ENST00000451332 387 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 MTND1P12-201ENST00000455231 147 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC079804.1-201ENST00000461922 436 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RN7SL177P-201ENST00000476596 299 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC093270.2-201ENST00000486157 792 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC010587.1-201ENST00000505809 469 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC105914.1-201ENST00000511798 226 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-445P-201ENST00000516949 107 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AP003497.1-201ENST00000528472 562 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AP000907.4-201ENST00000604143 237 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AL031666.3-201ENST00000609320 1006 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 SDR42E1P1-201ENST00000611327 477 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC108467.2-201ENST00000617640 1597 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC018445.2-201ENST00000622987 260 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC007546.2-201ENST00000623996 360 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 U3.53-201ENST00000628922 216 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 AC105074.1-201ENST00000623380 3095 ntBASIC4.08□□□□□ -1.76
PTCHD4Q6ZW05 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC010928.1-201ENST00000592477 1447 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL590240.1-201ENST00000334118 313 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 RNU4-1-201ENST00000363925 141 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-1090P-201ENST00000364065 94 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-359P-201ENST00000365466 108 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 MT-TC-201ENST00000387405 66 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL645927.1-201ENST00000396783 406 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CYP4F29P-201ENST00000420685 446 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL662791.1-201ENST00000441992 928 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 NFU1P2-201ENST00000448700 469 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms