Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CYCSP2-201ENST00000558168 301 ntBASIC3.51□□□□□ -1.85
CASC4Q6P4E1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 AC053481.3-201ENST00000577881 843 ntBASIC3.51□□□□□ -1.85
CASC4Q6P4E1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 AP000776.1-201ENST00000530032 1663 ntBASIC3.51□□□□□ -1.85
CASC4Q6P4E1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CASC4Q6P4E1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 RPL23AP57-201ENST00000332361 466 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL359837.1-201ENST00000381357 287 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL031679.1-201ENST00000400616 525 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 MUPP-201ENST00000438111 566 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL353691.1-201ENST00000451332 387 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 MTCO3P11-201ENST00000455103 774 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 ST13P14-201ENST00000474095 734 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC108729.1-201ENST00000487812 947 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC091951.3-201ENST00000504093 246 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC020699.1-201ENST00000505161 445 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC010587.2-201ENST00000511727 448 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 OR5AK1P-201ENST00000524837 922 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC011602.1-201ENST00000546484 331 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 MTND4P33-201ENST00000556706 766 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC009712.1-201ENST00000564938 316 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC106785.1-201ENST00000565935 262 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL390208.1-201ENST00000605885 644 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AP000240.1-201ENST00000609910 452 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC245297.2-201ENST00000610119 565 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC110801.1-201ENST00000623590 212 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC034229.5-201ENST00000624258 185 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AL022578.1-201ENST00000439330 1433 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 OR4G11P-202ENST00000642116 1414 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC092326.2-201ENST00000624772 1561 ntBASIC3.5□□□□□ -1.85
CASC4Q6P4E1 AC032011.1-201ENST00000611703 1549 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AC116096.1-201ENST00000566804 2314 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 ZNF826P-207ENST00000622273 1910 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 OR5H2-201ENST00000355273 945 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 RNU6-343P-201ENST00000364709 104 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 DEFB109C-201ENST00000382575 264 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 DEFB109B-201ENST00000382656 264 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 RNU6-952P-201ENST00000391164 108 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 RPL21P17-201ENST00000397467 475 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AC126124.2-201ENST00000413542 321 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 OR1AA1P-201ENST00000419597 916 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 CR769776.1-201ENST00000441254 787 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AL359073.1-201ENST00000448036 403 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 ARPC3P5-201ENST00000448802 534 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 HMGB3P8-201ENST00000449709 577 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 AC097262.1-201ENST00000452559 548 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 SNORD105B-201ENST00000458770 79 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 RPL21P104-201ENST00000464143 478 ntBASIC3.49□□□□□ -1.85
CASC4Q6P4E1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.49□□□□□ -1.85
CASC4Q6P4E1 KLHL2P1-201ENST00000508691 521 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms