Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 GAPDHP17-201ENST00000449858 1001 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 MTND1P3-201ENST00000484956 952 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 RNU1-61P-201ENST00000516107 151 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 HMGN1P28-201ENST00000521340 364 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 ERHP1-201ENST00000523006 310 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 MIR4480-201ENST00000582492 71 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 CKS1BP3-201ENST00000600888 237 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AL359999.1-201ENST00000604513 294 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 BX664608.1-201ENST00000610519 487 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC104073.3-201ENST00000610942 955 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 AC087385.3-201ENST00000620477 187 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PPP4R4Q6NUP7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PPP4R4Q6NUP7 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RNU6-223P-201ENST00000362830 107 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RHOT1P2-201ENST00000366423 333 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MIR585-201ENST00000384887 94 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 OR6C69P-201ENST00000394268 893 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 FCF1P10-201ENST00000407590 479 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RNU2-66P-201ENST00000410650 161 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 HMGN1P24-201ENST00000412282 298 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC004552.1-201ENST00000419089 348 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 CYP4F29P-201ENST00000420685 446 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RPL23AP38-201ENST00000423801 469 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AL360081.1-201ENST00000428299 555 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RPL21P91-201ENST00000429231 479 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MTND1P27-201ENST00000451117 902 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RPL7P15-201ENST00000461190 712 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 KLF3P2-201ENST00000465138 268 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 RPS26P3-201ENST00000470205 348 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC090543.2-201ENST00000483963 348 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC004057.1-201ENST00000485827 348 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC015795.1-201ENST00000513669 327 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 SNORA70.16-201ENST00000516390 95 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 OR5D15P-201ENST00000531671 942 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC008033.2-201ENST00000542626 177 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AL049839.1-201ENST00000556151 657 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC009117.1-201ENST00000563948 554 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MIR3921-201ENST00000577308 85 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MIR3667-201ENST00000581025 74 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC068790.3-201ENST00000602988 553 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AL136363.2-201ENST00000604173 851 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC020634.1-201ENST00000608701 549 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC004908.2-201ENST00000609090 574 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC024941.1-201ENST00000612250 334 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AL603758.1-201ENST00000618654 241 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 AC010149.2-201ENST00000637608 315 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 DDX10P1-201ENST00000448545 1933 ntBASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PPP4R4Q6NUP7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC002546.1-201ENST00000588041 2504 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms