Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC234064.1-201ENST00000436312 247 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC026414.1-201ENST00000504046 698 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC016550.1-201ENST00000505348 785 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNA5SP468-201ENST00000516782 93 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AL390240.1-201ENST00000612950 384 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC018926.1-201ENST00000616335 435 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC092650.2-201ENST00000619984 902 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 DBF4P1-201ENST00000412976 1892 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 MTND5P7-201ENST00000413558 1798 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATL3Q6DD88 RNVU1-3-201ENST00000364313 161 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 MIR23B-201ENST00000384832 97 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 MTCO2P31-201ENST00000402702 684 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 RNU4-65P-201ENST00000410473 140 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 TOMM22P1-201ENST00000418578 312 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 RPL31P54-201ENST00000429803 370 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 ARF4P4-201ENST00000439608 520 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 NECAP1P2-201ENST00000455668 727 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 TRBV26-201ENST00000456572 344 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC006445.1-201ENST00000491925 405 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 RNU1-61P-201ENST00000516107 151 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ATL3Q6DD88 HPRT1P3-201ENST00000539521 576 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC008507.2-201ENST00000588402 1176 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 BNIP3P11-201ENST00000603878 563 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC002487.1-201ENST00000604565 994 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 CYCSP41-201ENST00000616920 296 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AC007275.1-201ENST00000621243 671 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 AL161637.1-201ENST00000622380 412 ntBASIC3.29□□□□□ -1.88
ATL3Q6DD88 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATL3Q6DD88 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
ATL3Q6DD88 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATL3Q6DD88 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATL3Q6DD88 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 RNU6-50P-201ENST00000362356 103 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 SNORD116-23-201ENST00000384645 92 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 MIR181A2-201ENST00000384863 110 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 MIR7-3-201ENST00000384898 110 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 SNORA48.7-201ENST00000391302 135 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 ATP5F1P3-201ENST00000397213 657 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL024507.1-201ENST00000412741 274 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL133384.1-201ENST00000412744 351 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 RAD23BP2-201ENST00000416003 1207 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL513043.1-201ENST00000439124 535 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 TRIM60P18-201ENST00000441518 828 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC010285.1-201ENST00000470580 392 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 MTCO3P44-201ENST00000510977 541 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATL3Q6DD88 MTND2P7-201ENST00000521337 640 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 CYB5AP5-201ENST00000549779 389 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AL355836.1-201ENST00000555951 870 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms