Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC098657.3-201ENST00000620434 263 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC004817.4-201ENST00000602396 3625 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AP001642.1-201ENST00000624727 2117 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC003973.3-201ENST00000624863 2822 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC083843.2-201ENST00000568248 6253 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 XPOTP1-201ENST00000443317 2398 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 Y_RNA.80-201ENST00000362996 102 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RNU6-890P-201ENST00000384121 107 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RNU6-39P-201ENST00000384344 107 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 Y_RNA.645-201ENST00000391229 102 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AL136131.1-201ENST00000406079 803 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC104333.2-201ENST00000422630 192 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC092832.1-201ENST00000422934 400 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 EI24P4-201ENST00000423683 1078 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 SDAD1P3-201ENST00000427380 333 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC073069.1-201ENST00000428657 441 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RPS24P8-201ENST00000431490 402 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 CYCSP24-201ENST00000445119 316 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RPL7P52-201ENST00000449200 742 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 GSTA11P-201ENST00000452866 669 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 HMGB1P15-201ENST00000453854 435 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RPS29P33-201ENST00000456717 146 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 RN7SL481P-201ENST00000477764 299 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RN7SL346P-201ENST00000491561 294 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RPL22P13-201ENST00000493291 347 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC090453.1-201ENST00000495560 436 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 RAB9BP1-201ENST00000519581 626 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AP000907.2-201ENST00000530827 353 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC128657.1-201ENST00000549459 145 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC074050.1-201ENST00000563247 211 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 MIR3672-201ENST00000584290 82 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC105224.1-201ENST00000587055 421 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC008814.1-201ENST00000603797 406 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC020634.1-201ENST00000608701 549 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AL356274.1-201ENST00000617064 410 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 PLCE1P1-201ENST00000622094 305 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF43Q68DV7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF43Q68DV7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.44□□□□□ -1.54
RNF43Q68DV7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 Y_RNA.22-201ENST00000362492 102 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 Y_RNA.396-201ENST00000383949 103 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 SNORA75B-201ENST00000384053 137 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 RPS4XP9-201ENST00000405151 780 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 RPL36AP36-201ENST00000418616 301 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC012065.2-201ENST00000421295 375 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 CHIAP3-201ENST00000423668 1133 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 RSL24D1P6-201ENST00000426934 401 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC010881.1-201ENST00000433830 235 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 AL161722.2-201ENST00000434731 981 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 RNU7-180P-201ENST00000459240 63 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 PABPC1P3-201ENST00000469174 459 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 RPS24P16-201ENST00000497294 392 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC097473.1-201ENST00000508142 408 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 Y_RNA.721-201ENST00000517207 102 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC008562.1-201ENST00000521763 330 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms