Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MTND5P1-201ENST00000445440 1375 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF734P-201ENST00000419494 1534 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-1287P-201ENST00000362914 107 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 Y_RNA.133-201ENST00000363428 110 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-1060P-201ENST00000384664 107 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL592114.1-201ENST00000403842 483 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 MIR1178-201ENST00000408396 91 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 U3.36-201ENST00000408418 213 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC091685.2-201ENST00000454924 864 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC108161.1-201ENST00000461060 402 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPS20P21-201ENST00000466859 343 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC104806.1-201ENST00000508720 308 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SKP66-201ENST00000516681 231 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC092490.3-201ENST00000545370 572 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC007566.2-201ENST00000603642 413 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC104662.1-201ENST00000604448 511 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL078596.1-201ENST00000624856 447 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC121333.1-201ENST00000567488 2709 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL445437.1-201ENST00000623157 3087 ntBASIC4.78□□□□□ -1.64
HLA-DQA1Q5Y7H0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
HLA-DQA1Q5Y7H0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.78□□□□□ -1.65
HLA-DQA1Q5Y7H0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC011155.1-201ENST00000316512 456 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORD113-7-201ENST00000363762 77 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-1105P-201ENST00000384774 107 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 Y_RNA.605-201ENST00000410577 105 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RN7SKP159-201ENST00000410657 292 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-516P-201ENST00000411381 104 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL591848.1-201ENST00000413092 322 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 EI24P4-201ENST00000423683 1078 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL7P46-201ENST00000425129 740 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC009238.2-201ENST00000431026 355 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 FABP5P14-201ENST00000437273 393 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC005094.1-201ENST00000440420 368 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL35AP28-201ENST00000459730 331 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL39P5-202ENST00000512505 151 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORA70.11-201ENST00000515987 138 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORA70.13-201ENST00000516116 138 ntBASIC4.77□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNA5SP454-201ENST00000517231 127 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms