Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC006390.1-201ENST00000508068 283 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC005178.1-201ENST00000508392 440 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 MTCO2P32-201ENST00000514865 403 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 OR6C7P-201ENST00000547875 934 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 SYF2P1-201ENST00000550658 413 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC106782.4-201ENST00000568264 210 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL669831.4-202ENST00000590817 238 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 WISP1-OT1-201ENST00000602893 642 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL355812.1-201ENST00000603215 216 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AP005264.7-201ENST00000625003 745 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC091925.2-201ENST00000625059 256 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL356473.1-201ENST00000406203 1408 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 CR381670.1-201ENST00000624291 1693 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL513185.3-201ENST00000433335 1300 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC138915.3-201ENST00000562908 1389 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL672296.1-201ENST00000427780 2158 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC091152.2-201ENST00000591628 2569 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 OR5P1P-201ENST00000299512 925 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RNU1-132P-201ENST00000364300 164 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 U1.1-201ENST00000384101 164 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL590704.1-201ENST00000402856 794 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL031577.2-201ENST00000404133 280 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 MTCYBP36-201ENST00000404146 440 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 TPMTP3-201ENST00000411928 735 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RPL7P8-201ENST00000411964 730 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL512326.1-201ENST00000443050 721 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RPL7P52-201ENST00000449200 742 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RPL36AP33-201ENST00000450395 310 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 KATNBL1P6-201ENST00000453433 915 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 HMGB1P15-201ENST00000453854 435 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 USP9YP10-201ENST00000454868 628 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RPL31P50-201ENST00000471002 296 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RPL30P6-201ENST00000475925 342 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC117522.2-201ENST00000510049 657 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC034159.1-201ENST00000513885 583 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RN7SKP13-201ENST00000515933 244 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 RNU1-103P-201ENST00000516502 125 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC013828.2-201ENST00000532487 235 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL121766.1-201ENST00000547436 487 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC063950.1-201ENST00000552036 308 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC007599.1-201ENST00000568688 1174 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL451044.1-201ENST00000604867 238 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL390208.1-201ENST00000605885 644 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC097468.3-201ENST00000607956 456 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AL391497.1-201ENST00000608671 547 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 uc_338.13-201ENST00000618243 179 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 ELL2P3-201ENST00000457883 1602 ntBASIC3.41□□□□□ -1.86
PDLIM3Q53GG5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 AL445523.1-201ENST00000451184 1362 ntBASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 CR383658.2-201ENST00000547576 1525 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms