Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 MIR3138-201ENST00000585238 82 ntBASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 MIR6716-201ENST00000613413 80 ntBASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD3Q3KNS1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 MIR331-201ENST00000362302 94 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 RPL23AP32-201ENST00000395315 459 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CIR1P3-201ENST00000405137 479 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 MTND3P17-201ENST00000416968 344 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC127526.1-201ENST00000417526 366 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 RPS12P5-201ENST00000423449 371 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC005517.2-201ENST00000424673 553 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC006548.1-201ENST00000427470 102 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 ISCA1P6-201ENST00000427740 390 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL136380.1-201ENST00000447970 162 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL162388.1-201ENST00000450912 352 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC104308.1-201ENST00000454621 333 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 RBM43P1-201ENST00000476891 1081 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 RPL21P103-201ENST00000479921 488 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 RNU6-27P-201ENST00000516146 107 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AP003385.6-201ENST00000531603 374 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 TOMM20P2-201ENST00000540082 421 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC123904.2-201ENST00000548059 300 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 SETP7-201ENST00000552169 453 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC099489.2-201ENST00000574976 260 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC020910.2-201ENST00000603635 610 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL355472.4-201ENST00000610233 626 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AL021997.2-201ENST00000615674 271 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC019278.1-201ENST00000623516 479 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC068880.5-201ENST00000624331 290 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CR381572.1-201ENST00000625098 102 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC055839.1-201ENST00000634467 498 ntBASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD3Q3KNS1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.21□□□□□ -1.73
PTCHD3Q3KNS1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
PTCHD3Q3KNS1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PTCHD3Q3KNS1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 RNA5SP175-201ENST00000364275 119 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 RPS3AP36-201ENST00000398190 775 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 HSPD1P16-201ENST00000402302 394 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL121834.1-202ENST00000404494 277 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 RNA5SP56-201ENST00000410277 118 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 RN7SKP235-201ENST00000410662 305 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 USP9YP36-201ENST00000424581 829 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC004975.1-201ENST00000428733 208 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL132765.1-201ENST00000434165 553 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 ABCF2P2-201ENST00000450549 296 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL672167.3-201ENST00000465951 960 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 TMEM248P1-201ENST00000510579 951 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 PTGES3P3-201ENST00000511479 482 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 SAP18P1-201ENST00000512058 390 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 RN7SKP116-201ENST00000516902 319 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 PHBP17-201ENST00000528576 541 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AL356432.3-201ENST00000568952 465 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 MIR3118-1-201ENST00000581787 76 ntBASIC4.21□□□□□ -1.74
PTCHD3Q3KNS1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms