Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 HMGB1P15-201ENST00000453854 435 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC010285.1-201ENST00000470580 392 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC118282.2-201ENST00000508739 374 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC008837.1-201ENST00000511513 412 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RN7SKP132-201ENST00000516001 208 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RNU6-276P-201ENST00000516114 96 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC019227.1-201ENST00000526902 510 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC118942.1-201ENST00000529674 1035 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AP002404.1-201ENST00000532005 451 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC010198.2-201ENST00000550612 259 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 MIR4672-201ENST00000583126 81 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AL606834.3-201ENST00000602615 496 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AL359893.1-201ENST00000447628 1580 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 RNU6-1257P-201ENST00000384625 110 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 Y_RNA.578-201ENST00000390903 88 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 MTCO2P31-201ENST00000402702 684 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC027644.1-201ENST00000419595 298 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 DPPA2P1-201ENST00000428060 556 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 COX6CP18-201ENST00000448769 222 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC117440.1-201ENST00000474107 571 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 HMGN2P13-201ENST00000476476 274 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC048346.1-201ENST00000510247 144 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC105914.1-201ENST00000511798 226 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC023632.1-201ENST00000518463 375 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 OR4A45P-201ENST00000529954 901 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 BNIP3P39-201ENST00000601077 554 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL022067.1-201ENST00000602426 454 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC092953.2-201ENST00000608000 699 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC093673.2-201ENST00000609674 331 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AC110801.1-201ENST00000623590 212 ntBASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SHROOM1Q2M3G4 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 MIR122-201ENST00000385044 85 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 SAR1AP2-201ENST00000392696 594 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 AL591034.1-201ENST00000407447 340 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 RNA5SP56-201ENST00000410277 118 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 RPL7P8-201ENST00000411964 730 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 AL135938.1-201ENST00000443141 297 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 RPL17P49-201ENST00000443728 411 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.6□□□□□ -1.83
SHROOM1Q2M3G4 AC026414.1-201ENST00000504046 698 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms