Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 STMN1P1-201ENST00000617809 440 ntBASIC2.32□□□□□ -2.04
FOXF1Q12946 AC010297.1-201ENST00000623948 149 ntBASIC2.32□□□□□ -2.04
FOXF1Q12946 U6.107-201ENST00000637108 79 ntBASIC2.32□□□□□ -2.04
FOXF1Q12946 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.32□□□□□ -2.04
FOXF1Q12946 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.32□□□□□ -2.04
FOXF1Q12946 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
FOXF1Q12946 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.32□□□□□ -2.04
FOXF1Q12946 MTND5P28-201ENST00000438005 1594 ntBASIC2.32□□□□□ -2.04
FOXF1Q12946 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
FOXF1Q12946 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXF1Q12946 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXF1Q12946 FTLP6-201ENST00000355274 422 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 SNORA51.12-201ENST00000384448 134 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 MIR142-201ENST00000384835 87 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 MIR1303-201ENST00000408625 86 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 HMGN2P35-201ENST00000412164 270 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 TATDN1P1-201ENST00000414123 891 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.31□□□□□ -2.04
FOXF1Q12946 AC005517.2-201ENST00000424673 553 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXF1Q12946 ZFAND6P1-201ENST00000434138 605 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXF1Q12946 FABP5P3-201ENST00000437960 408 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 TPRKBP1-201ENST00000456243 481 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 HMGN2P13-201ENST00000476476 274 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 AC087190.1-201ENST00000484462 480 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 HMGB1P38-201ENST00000490557 577 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXF1Q12946 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 RN7SKP244-201ENST00000516513 307 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 RNU6-362P-201ENST00000516736 90 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 AF279873.1-201ENST00000523393 313 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
FOXF1Q12946 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.31□□□□□ -2.04
FOXF1Q12946 AC027104.1-201ENST00000563702 681 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 AC040174.2-201ENST00000602701 465 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXF1Q12946 FRG1HP-204ENST00000617940 757 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 AC079228.1-201ENST00000624774 1049 ntBASIC2.31□□□□□ -2.04
FOXF1Q12946 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXF1Q12946 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXF1Q12946 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 AL031679.1-201ENST00000400616 525 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AL138880.1-201ENST00000405824 642 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 HMGB3P31-201ENST00000413333 595 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 PNRC2P1-201ENST00000423940 420 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC005189.1-201ENST00000431286 310 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 RSL24D1P8-201ENST00000434442 492 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC068135.1-201ENST00000446164 246 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 MTND2P6-201ENST00000455337 1030 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC008280.2-201ENST00000455473 307 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC126182.1-201ENST00000478134 357 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 KC877373.1-201ENST00000479066 408 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 MTCO3P35-201ENST00000485582 781 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXF1Q12946 TBCAP3-201ENST00000512475 312 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC016065.2-201ENST00000514530 444 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC090136.1-201ENST00000520009 240 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXF1Q12946 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AL391156.1-201ENST00000554965 554 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC012182.1-201ENST00000570133 895 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AL390838.2-201ENST00000602394 274 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AL356575.1-201ENST00000603008 283 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AL109653.1-201ENST00000603091 248 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 BNIP3P19-201ENST00000605397 577 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXF1Q12946 AC104446.1-201ENST00000613728 1321 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 AP001350.1-201ENST00000601906 1524 ntBASIC2.3□□□□□ -2.04
FOXF1Q12946 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.3□□□□□ -2.04
FOXF1Q12946 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXF1Q12946 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXF1Q12946 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
FOXF1Q12946 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms