Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.39□□□□□ -1.87
SCN1BQ07699 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC011260.1-201ENST00000578420 472 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MIR5096-201ENST00000583713 70 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MIR3138-201ENST00000585238 82 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AL592436.1-201ENST00000605135 558 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AC107952.2-201ENST00000606048 486 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AL139418.1-201ENST00000613613 177 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC091046.2-201ENST00000620775 665 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SCN1BQ07699 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
SCN1BQ07699 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC008568.2-201ENST00000623862 2313 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SCN1BQ07699 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SCN1BQ07699 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN1BQ07699 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 RNU6-853P-201ENST00000364306 107 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 RPS26P8-201ENST00000393490 348 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 MTND4P13-201ENST00000402078 1023 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 PPIAP31-201ENST00000405422 495 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AL354719.1-201ENST00000406535 843 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.38□□□□□ -1.87
SCN1BQ07699 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC112653.1-201ENST00000443851 386 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN1BQ07699 HSPE1P6-201ENST00000479457 291 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AL049874.1-201ENST00000489560 388 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AC034244.1-201ENST00000507687 207 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AC034159.1-201ENST00000513885 583 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.38□□□□□ -1.87
SCN1BQ07699 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.38□□□□□ -1.87
SCN1BQ07699 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN1BQ07699 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC023575.1-201ENST00000580510 358 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AL450489.1-201ENST00000612071 468 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 MIR8059-201ENST00000620427 81 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 AP002782.1-201ENST00000623107 614 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.38□□□□□ -1.87
SCN1BQ07699 AC010608.2-201ENST00000624830 470 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SCN1BQ07699 AP000526.1-201ENST00000603308 1388 ntBASIC3.38□□□□□ -1.87
SCN1BQ07699 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 RNU6-462P-201ENST00000362659 105 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 RNU5E-8P-201ENST00000363502 116 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 RNU1-32P-201ENST00000363937 159 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 OR6C69P-201ENST00000394268 893 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 RPS3AP26-201ENST00000398259 784 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 MIR937-201ENST00000401271 86 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 MRPL50P2-201ENST00000416821 482 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 MTCO2P21-201ENST00000419780 677 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 Z80107.1-201ENST00000436830 412 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.37□□□□□ -1.87
SCN1BQ07699 RANP8-201ENST00000444720 713 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 RPL36AP33-201ENST00000450395 310 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.37□□□□□ -1.87
SCN1BQ07699 ANKRD26P4-201ENST00000455755 950 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 UBTFL10-201ENST00000528532 562 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
SCN1BQ07699 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCN1BQ07699 MIR4284-201ENST00000578924 81 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms