Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CR589904.2-201ENST00000612533 440 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 AC010378.1-201ENST00000619270 362 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 MIR6132-201ENST00000622083 109 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 AC000123.2-201ENST00000623124 461 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 AL160394.1-201ENST00000624765 724 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TFF3Q07654 OR4G2P-202ENST00000641004 1759 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
TFF3Q07654 AC008432.1-201ENST00000615912 1320 ntBASIC1.89□□□□□ -2.11
TFF3Q07654 AC022336.2-201ENST00000568966 2538 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AC244517.1-201ENST00000606030 2086 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TFF3Q07654 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.88□□□□□ -2.11
TFF3Q07654 OR51B8P-201ENST00000449892 769 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 TRBV26-201ENST00000456572 344 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AC072039.1-201ENST00000477611 581 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 RPL38P4-201ENST00000502376 214 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.88□□□□□ -2.11
TFF3Q07654 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
TFF3Q07654 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.88□□□□□ -2.11
TFF3Q07654 RNU6-56P-201ENST00000516986 93 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.88□□□□□ -2.11
TFF3Q07654 AL356266.1-201ENST00000623311 483 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.88□□□□□ -2.11
TFF3Q07654 AC011460.1-201ENST00000636268 1834 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AC002546.1-201ENST00000588041 2504 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TFF3Q07654 AC012321.1-201ENST00000561622 1588 ntBASIC1.88□□□□□ -2.11
TFF3Q07654 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.88□□□□□ -2.11
TFF3Q07654 AC011978.2-201ENST00000569835 2054 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
TFF3Q07654 OR5H15-201ENST00000383696 930 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC073901.1-201ENST00000462471 408 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 AC092451.1-201ENST00000480211 153 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 GTF2IP9-201ENST00000502460 301 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC117522.2-201ENST00000510049 657 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.87□□□□□ -2.11
TFF3Q07654 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.87□□□□□ -2.11
TFF3Q07654 AL133393.1-201ENST00000603277 287 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 AL022099.1-201ENST00000604551 712 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 AC011890.2-201ENST00000613393 294 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 SNHG22-203ENST00000617833 660 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC090617.7-201ENST00000623952 126 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 AC092184.1-201ENST00000625042 715 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.87□□□□□ -2.11
TFF3Q07654 AC093591.3-201ENST00000634516 308 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 FO624990.1-201ENST00000636373 85 ntBASIC1.87□□□□□ -2.11
TFF3Q07654 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TFF3Q07654 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 SNORA48.3-201ENST00000391081 134 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 RNU6-1140P-201ENST00000410517 106 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 RNU2-37P-201ENST00000410695 177 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 MORF4L1P6-201ENST00000418771 268 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 FNDC3CP-201ENST00000420795 1155 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 WARS2P1-201ENST00000429678 537 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.86□□□□□ -2.11
TFF3Q07654 AC104308.1-201ENST00000454621 333 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 TVP23BP2-201ENST00000455082 615 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 RPL23AP70-201ENST00000483361 460 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 TTC39CP1-201ENST00000512513 755 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 AC021733.2-201ENST00000518830 497 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 AP000889.2-201ENST00000532684 490 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TFF3Q07654 HSPE1P20-201ENST00000538133 289 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.86□□□□□ -2.11
TFF3Q07654 AC090695.1-201ENST00000561269 1222 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TFF3Q07654 AP004247.3-201ENST00000608682 624 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 MIR6845-201ENST00000613182 61 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TFF3Q07654 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.86□□□□□ -2.11
TFF3Q07654 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms