Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC012321.1-201ENST00000561622 1588 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 MIR365B-201ENST00000362317 111 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 RNU6-1331P-201ENST00000363658 106 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 RNU4-27P-201ENST00000410889 139 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AC092648.1-201ENST00000425870 423 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.36□□□□□ -1.87
COL16A1Q07092 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.36□□□□□ -1.87
COL16A1Q07092 MTCYBP31-201ENST00000438855 1122 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 MTND2P22-201ENST00000444325 1033 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 HMGB1P48-201ENST00000446155 598 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AL009048.1-201ENST00000450437 298 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AL354710.1-201ENST00000453641 246 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AL122001.1-201ENST00000457027 370 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.36□□□□□ -1.87
COL16A1Q07092 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.36□□□□□ -1.87
COL16A1Q07092 AGGF1P5-201ENST00000567900 919 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 AC040904.1-201ENST00000590850 223 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL16A1Q07092 MIR8070-201ENST00000616510 88 ntBASIC3.36□□□□□ -1.87
COL16A1Q07092 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL16A1Q07092 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL16A1Q07092 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL16A1Q07092 AC005539.1-201ENST00000443768 1479 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 RNU6-697P-201ENST00000363348 107 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 Z98941.1-201ENST00000407764 100 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC048351.1-201ENST00000420064 602 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC009414.1-201ENST00000427200 443 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC092634.2-201ENST00000428146 1010 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 RPS26P40-201ENST00000435209 294 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 MTCO2P20-201ENST00000437339 673 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AL117351.1-201ENST00000438864 766 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
COL16A1Q07092 ST13P20-201ENST00000447996 1065 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 RPL23AP42-201ENST00000471152 471 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 HMGB1P46-201ENST00000520062 610 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.35□□□□□ -1.87
COL16A1Q07092 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 AC087894.1-201ENST00000538359 518 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.35□□□□□ -1.87
COL16A1Q07092 MTCYBP28-201ENST00000566728 1132 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC023043.2-201ENST00000589678 1026 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 NIFKP6-201ENST00000598115 845 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC234772.3-201ENST00000602277 528 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 Z94722.1-201ENST00000604328 474 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.35□□□□□ -1.87
COL16A1Q07092 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
COL16A1Q07092 MIR8084-201ENST00000614105 89 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC078880.5-201ENST00000617845 421 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 AC026523.2-201ENST00000625039 7739 ntBASIC3.35□□□□□ -1.87
COL16A1Q07092 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL16A1Q07092 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL16A1Q07092 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL16A1Q07092 AL512646.1-201ENST00000269395 1077 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 MIR708-201ENST00000390708 88 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 U8.13-201ENST00000390842 128 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 RNA5SP107-201ENST00000411358 122 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 UBE2V1P9-201ENST00000414760 368 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 MTCO2P21-201ENST00000419780 677 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.34□□□□□ -1.87
COL16A1Q07092 FGF7P3-201ENST00000454645 303 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 RPL32P14-201ENST00000463196 378 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC016687.1-201ENST00000482574 353 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 NIPA2P2-201ENST00000496376 1083 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.34□□□□□ -1.87
COL16A1Q07092 MTCO3P28-201ENST00000513351 515 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.34□□□□□ -1.87
COL16A1Q07092 SNORA19.3-201ENST00000516165 130 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC107918.3-201ENST00000533272 382 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.34□□□□□ -1.87
COL16A1Q07092 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.34□□□□□ -1.87
COL16A1Q07092 AC090888.2-201ENST00000559765 1144 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.34□□□□□ -1.87
COL16A1Q07092 AC022022.2-201ENST00000602989 360 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 DUXAP3-201ENST00000603616 594 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
COL16A1Q07092 AL512427.1-201ENST00000618593 349 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL16A1Q07092 AC132825.7-201ENST00000638744 335 ntBASIC3.34□□□□□ -1.87
COL16A1Q07092 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.34□□□□□ -1.87
COL16A1Q07092 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
COL16A1Q07092 AL031985.3-201ENST00000565390 2449 ntBASIC3.34□□□□□ -1.88
COL16A1Q07092 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
COL16A1Q07092 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 RNU6-792P-201ENST00000363490 107 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.33□□□□□ -1.88
COL16A1Q07092 Z86062.1-201ENST00000406773 777 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.33□□□□□ -1.88
COL16A1Q07092 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.33□□□□□ -1.88
COL16A1Q07092 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.33□□□□□ -1.88
COL16A1Q07092 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
COL16A1Q07092 ARL5AP3-201ENST00000439327 386 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 AL591719.1-201ENST00000444669 744 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 BUD31P2-201ENST00000449374 300 ntBASIC3.33□□□□□ -1.88
COL16A1Q07092 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms