Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL590399.6-201ENST00000446396 307 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC016696.1-201ENST00000446949 318 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 RPL29P29-201ENST00000448725 423 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC079168.2-201ENST00000453977 416 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 AL163973.1-201ENST00000484753 577 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 DEFB109F-201ENST00000491870 277 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 OR5B19P-201ENST00000531766 928 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 GLYCAM1-201ENST00000546596 285 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC128657.1-201ENST00000549459 145 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC007424.1-203ENST00000554613 687 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.67□□□□□ -1.66
IRF9Q00978 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC010525.2-201ENST00000590920 195 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC006272.2-201ENST00000594725 163 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC010591.1-201ENST00000603941 649 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC087045.1-201ENST00000605856 382 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AC105429.2-201ENST00000610567 517 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AL136313.1-201ENST00000624804 202 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 AP000843.1-201ENST00000624880 701 ntBASIC4.67□□□□□ -1.66
IRF9Q00978 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
IRF9Q00978 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
IRF9Q00978 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IRF9Q00978 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
IRF9Q00978 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 MTCO1P24-201ENST00000515438 1558 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 SAMMSON-226ENST00000642089 1582 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.66□□□□□ -1.66
IRF9Q00978 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
IRF9Q00978 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
IRF9Q00978 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 SNORA58B-201ENST00000364259 136 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 MIR454-201ENST00000390180 115 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.66□□□□□ -1.66
IRF9Q00978 SDCBPP3-201ENST00000419629 891 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC112498.1-201ENST00000444401 332 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 CBWD4P-201ENST00000445695 655 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC073415.1-201ENST00000449240 153 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 RPL36AP13-201ENST00000457490 317 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 GMFBP1-201ENST00000467831 427 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 RPL5P22-201ENST00000480199 884 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 RPSAP50-201ENST00000481955 852 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC093270.2-201ENST00000486157 792 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 RN7SL808P-201ENST00000496066 299 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 EIF4EP3-201ENST00000498782 656 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 RPL38P4-201ENST00000502376 214 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 RNU6-64P-201ENST00000517119 105 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.66□□□□□ -1.66
IRF9Q00978 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.66□□□□□ -1.66
IRF9Q00978 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 ARL2BPP2-201ENST00000550907 489 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 HMGN2P6-201ENST00000551091 273 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.66□□□□□ -1.66
IRF9Q00978 AC090948.1-201ENST00000607464 549 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.66□□□□□ -1.66
IRF9Q00978 AP001521.2-201ENST00000608772 546 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 FAM27B-201ENST00000610601 213 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 EIF3FP1-201ENST00000613970 806 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AL136221.1-201ENST00000621449 509 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 CR381572.2-201ENST00000624852 397 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AL136164.3-201ENST00000624429 3978 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 AL139811.1-201ENST00000424779 2299 ntBASIC4.66□□□□□ -1.66
IRF9Q00978 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.66□□□□□ -1.66
IRF9Q00978 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
IRF9Q00978 MAPK10-304ENST00000641341 3984 ntBASIC4.65□□□□□ -1.66
IRF9Q00978 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
IRF9Q00978 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.65□□□□□ -1.66
IRF9Q00978 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.65□□□□□ -1.66
IRF9Q00978 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
IRF9Q00978 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
IRF9Q00978 Y_RNA.142-201ENST00000363491 102 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 RNU6-637P-201ENST00000384050 107 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 MIR195-201ENST00000385194 87 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 RN7SKP213-201ENST00000410746 298 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 MTCYBP8-201ENST00000422855 651 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 MRPS18BP2-201ENST00000434310 759 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 MTATP6P16-201ENST00000434543 526 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms