Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL691449.1-201ENST00000426570 421 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AL445669.1-201ENST00000426743 755 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 AC109583.1-201ENST00000432156 268 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 MTCYBP45-201ENST00000435243 565 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN20P56880 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 CDC27P1-201ENST00000445384 715 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 Z95327.1-201ENST00000446082 482 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN20P56880 RPS11P1-201ENST00000451072 473 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 FABP3P2-201ENST00000453169 399 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 snoU13.8-201ENST00000458890 104 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 RNA5SP269-201ENST00000459032 137 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 snoU13.3-201ENST00000459441 104 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 RPS4XP10-201ENST00000465034 731 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AP000797.1-201ENST00000478870 387 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 COX7A2P2-201ENST00000505291 250 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC091435.1-201ENST00000505442 584 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN20P56880 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 AP000873.5-201ENST00000533906 236 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN20P56880 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN20P56880 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN20P56880 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN20P56880 RSL24D1P11-201ENST00000591045 491 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 IGHV3-29-201ENST00000604817 344 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 BCRP9-201ENST00000605312 388 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC024941.1-201ENST00000612250 334 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AC093591.3-201ENST00000634516 308 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 AL773545.4-201ENST00000637262 310 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN20P56880 AL513478.4-201ENST00000641636 310 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN20P56880 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN20P56880 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
CLDN20P56880 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 RNY4P24-201ENST00000362735 96 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 RNA5SP258-201ENST00000362750 119 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 RNU6-263P-201ENST00000363811 107 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 Y_RNA.234-201ENST00000364409 97 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 Y_RNA.553-201ENST00000384670 102 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 RNY3P10-201ENST00000384764 102 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 SNORA57.1-201ENST00000391227 145 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 MTCYBP36-201ENST00000404146 440 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 RPS7P13-201ENST00000413955 498 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 MRPS18BP2-201ENST00000434310 759 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AP000936.2-201ENST00000447151 681 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 RNU6-956P-201ENST00000458868 103 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 SNORD108-201ENST00000459332 71 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AL672167.3-201ENST00000465951 960 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CLDN20P56880 AP000926.1-201ENST00000479573 241 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC110792.1-201ENST00000491826 472 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC034222.1-201ENST00000494052 532 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC004069.2-201ENST00000505438 1114 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC026402.1-201ENST00000513642 170 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC025881.1-201ENST00000518851 512 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 IGHV3-32-201ENST00000519182 355 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 AC135001.1-201ENST00000544546 283 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN20P56880 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN20P56880 AC239868.4-201ENST00000608318 671 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC004825.2-201ENST00000616634 455 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 AC009878.1-201ENST00000621819 340 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms