Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 AL672167.1-206ENST00000356293 943 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 Y_RNA.51-201ENST00000362725 102 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 RNU4-21P-201ENST00000362802 126 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 RNU6-263P-201ENST00000363811 107 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 RNU6-213P-201ENST00000384051 104 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MT-TH-201ENST00000387441 69 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 SNORA26.8-201ENST00000391306 124 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 DHFRP6-201ENST00000401776 268 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 PPIAP31-201ENST00000405422 495 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 SNORA11.2-201ENST00000408318 127 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 RPL7P8-201ENST00000411964 730 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC4P56524 RPL23AP39-201ENST00000415533 405 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC083875.1-201ENST00000419509 405 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC244098.2-201ENST00000422068 99 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC4P56524 OR8F1P-201ENST00000425243 930 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC4P56524 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC129850.1-201ENST00000436203 508 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 UBE2FP3-201ENST00000436366 524 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 Z74696.2-201ENST00000436514 498 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MTCO2P16-201ENST00000436962 677 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MTCYBP39-201ENST00000437562 491 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC4P56524 KATNBL1P6-201ENST00000453433 915 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 CFTRP1-201ENST00000456646 183 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 MEMO1P3-201ENST00000459811 302 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC078785.3-201ENST00000476607 425 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 OR5H5P-201ENST00000503164 928 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.05□□□□□ -1.76
HDAC4P56524 RNA5SP143-201ENST00000516936 115 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC106038.2-201ENST00000520706 568 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC087276.1-201ENST00000529659 480 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC007115.1-201ENST00000546853 234 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.05□□□□□ -1.76
HDAC4P56524 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC120057.2-201ENST00000571520 271 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AL669831.4-202ENST00000590817 238 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC106028.5-201ENST00000610332 395 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 AC084782.3-201ENST00000612282 578 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 FAM91A3P-201ENST00000456826 2544 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 BDP1P-201ENST00000582658 1990 ntBASIC4.05□□□□□ -1.76
HDAC4P56524 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
HDAC4P56524 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC4P56524 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
HDAC4P56524 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 RPL23AP57-201ENST00000332361 466 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RNU6-462P-201ENST00000362659 105 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 Y_RNA.77-201ENST00000362962 107 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RNA5SP88-201ENST00000365560 109 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 RNU6-730P-201ENST00000383954 104 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 RNA5SP56-201ENST00000410277 118 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RNU4-78P-201ENST00000410940 126 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.04□□□□□ -1.76
HDAC4P56524 BTF3L4P1-201ENST00000413813 468 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 EI24P1-201ENST00000416584 867 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RPL7P30-201ENST00000420888 709 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 ARF4P2-201ENST00000430209 526 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC098826.1-201ENST00000433943 471 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RPL23AP83-201ENST00000434984 473 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 SNRPEP7-201ENST00000438350 220 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms