Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.01□□□□□ -1.93
PKNOX1P55347 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.01□□□□□ -1.93
PKNOX1P55347 MTCO1P3-201ENST00000429327 192 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.01□□□□□ -1.93
PKNOX1P55347 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 CYCSP35-201ENST00000451978 304 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 NECAP1P2-201ENST00000455668 727 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 RPS20P24-201ENST00000457473 361 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 CAB39P1-201ENST00000502277 460 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.01□□□□□ -1.93
PKNOX1P55347 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC008127.2-201ENST00000549925 1075 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC119501.1-201ENST00000603646 475 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 AP001521.1-201ENST00000609150 300 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 RNU6-1192P-201ENST00000612197 107 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 RNU6-489P-201ENST00000618289 107 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.01□□□□□ -1.93
PKNOX1P55347 MTCO1P23-201ENST00000415223 1526 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.01□□□□□ -1.93
PKNOX1P55347 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
PKNOX1P55347 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 CRP-202ENST00000368110 667 ntTSL 3 BASIC3□□□□□ -1.93
PKNOX1P55347 SNORA7.4-201ENST00000384249 137 ntBASIC3□□□□□ -1.93
PKNOX1P55347 SNORD15B-201ENST00000384714 146 ntBASIC3□□□□□ -1.93
PKNOX1P55347 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3□□□□□ -1.93
PKNOX1P55347 AL357075.1-201ENST00000404107 726 ntBASIC3□□□□□ -1.93
PKNOX1P55347 RPL7P25-201ENST00000404151 721 ntBASIC3□□□□□ -1.93
PKNOX1P55347 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 RNU6-712P-201ENST00000410558 100 ntBASIC3□□□□□ -1.93
PKNOX1P55347 DPRXP1-201ENST00000426312 460 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3□□□□□ -1.93
PKNOX1P55347 SEPT7P5-201ENST00000434048 306 ntBASIC3□□□□□ -1.93
PKNOX1P55347 GAPDHP27-201ENST00000447427 1020 ntBASIC3□□□□□ -1.93
PKNOX1P55347 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
PKNOX1P55347 snoU13.4-201ENST00000458916 104 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC109925.1-201ENST00000478069 331 ntBASIC3□□□□□ -1.93
PKNOX1P55347 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
PKNOX1P55347 RNU6-27P-201ENST00000516146 107 ntBASIC3□□□□□ -1.93
PKNOX1P55347 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 AP000619.3-201ENST00000535634 1127 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC126177.3-201ENST00000551839 688 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3□□□□□ -1.93
PKNOX1P55347 AC138915.2-201ENST00000569776 97 ntBASIC3□□□□□ -1.93
PKNOX1P55347 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3□□□□□ -1.93
PKNOX1P55347 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3□□□□□ -1.93
PKNOX1P55347 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 AL606834.3-201ENST00000602615 496 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC012669.1-201ENST00000603209 283 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC024060.1-201ENST00000607052 494 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AL590240.3-201ENST00000621416 943 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AP003485.1-201ENST00000625093 753 ntBASIC3□□□□□ -1.93
PKNOX1P55347 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 AC084035.1-201ENST00000634543 607 ntBASIC3□□□□□ -1.93
PKNOX1P55347 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
PKNOX1P55347 API5P2-201ENST00000397055 1498 ntBASIC3□□□□□ -1.93
PKNOX1P55347 AC108206.1-201ENST00000570186 4159 ntBASIC3□□□□□ -1.93
PKNOX1P55347 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PKNOX1P55347 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PKNOX1P55347 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PKNOX1P55347 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 RNU6-1176P-201ENST00000390955 107 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 RNU6-1000P-201ENST00000391066 106 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 RPL5P18-201ENST00000406671 891 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC092447.6-201ENST00000414578 210 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 MTND4P3-201ENST00000417829 541 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC097713.2-201ENST00000430199 356 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AL159987.2-201ENST00000432754 307 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 GTF2IP7-202ENST00000436677 309 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 HMGB1P15-201ENST00000453854 435 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 RPL21P41-201ENST00000459863 264 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 RN7SL20P-201ENST00000488827 297 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 KLRA1P-201ENST00000503499 986 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms