Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-989P-201ENST00000362756 107 ntBASIC3.78□□□□□ -1.8
CDH12P55289 U8.3-201ENST00000363321 132 ntBASIC3.78□□□□□ -1.8
CDH12P55289 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDH12P55289 RPS3AP36-201ENST00000398190 775 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 FCF1P9-201ENST00000412546 282 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC011933.1-201ENST00000413334 321 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC005517.2-201ENST00000424673 553 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AL732292.1-201ENST00000426692 226 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC009961.2-201ENST00000435771 251 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
CDH12P55289 CBX1P1-201ENST00000440184 427 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RPL17P49-201ENST00000443728 411 ntBASIC3.78□□□□□ -1.8
CDH12P55289 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 AL353691.1-201ENST00000451332 387 ntBASIC3.78□□□□□ -1.8
CDH12P55289 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 RPS20P32-201ENST00000456044 356 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RPS20P24-201ENST00000457473 361 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC116533.1-201ENST00000459748 321 ntBASIC3.78□□□□□ -1.8
CDH12P55289 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 RPS29P22-201ENST00000472363 168 ntBASIC3.78□□□□□ -1.8
CDH12P55289 TMED11P-201ENST00000479478 690 ntBASIC3.78□□□□□ -1.8
CDH12P55289 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 AC012170.1-201ENST00000495139 359 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC105252.1-201ENST00000503089 286 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH12P55289 AC093824.1-201ENST00000508796 343 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 RNU7-143P-201ENST00000516781 65 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RNU2-46P-201ENST00000517038 113 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RNU6-430P-201ENST00000517078 107 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 AP003181.2-201ENST00000528941 181 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC105233.3-201ENST00000531125 744 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH12P55289 HNRNPCP4-201ENST00000571636 900 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC034268.2-201ENST00000571784 482 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC022655.2-201ENST00000577280 318 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC090615.1-201ENST00000577519 154 ntBASIC3.78□□□□□ -1.8
CDH12P55289 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 AL161729.3-201ENST00000603533 673 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC091304.9-201ENST00000612091 226 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RN7SL722P-201ENST00000617780 284 ntBASIC3.78□□□□□ -1.8
CDH12P55289 RN7SL565P-201ENST00000618246 284 ntBASIC3.78□□□□□ -1.8
CDH12P55289 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH12P55289 AC040168.1-201ENST00000623594 991 ntBASIC3.78□□□□□ -1.8
CDH12P55289 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH12P55289 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
CDH12P55289 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH12P55289 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH12P55289 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDH12P55289 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH12P55289 AL049555.1-201ENST00000562834 1933 ntBASIC3.78□□□□□ -1.81
CDH12P55289 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CDH12P55289 AL592437.2-201ENST00000421655 2434 ntBASIC3.78□□□□□ -1.81
CDH12P55289 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CDH12P55289 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
CDH12P55289 RNU5A-6P-201ENST00000384136 116 ntBASIC3.77□□□□□ -1.81
CDH12P55289 Y_RNA.493-201ENST00000384422 102 ntBASIC3.77□□□□□ -1.81
CDH12P55289 MT-TC-201ENST00000387405 66 ntBASIC3.77□□□□□ -1.81
CDH12P55289 U3.22-201ENST00000391120 215 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AL359704.1-201ENST00000411586 781 ntBASIC3.77□□□□□ -1.81
CDH12P55289 RAD23BP2-201ENST00000416003 1207 ntBASIC3.77□□□□□ -1.81
CDH12P55289 C1DP2-201ENST00000418167 426 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AL589872.1-201ENST00000426602 288 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH12P55289 AC093392.2-201ENST00000450682 337 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC009963.2-201ENST00000453431 138 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC099563.1-201ENST00000456086 418 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH12P55289 snoU13.8-201ENST00000458890 104 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC011276.1-201ENST00000469688 323 ntBASIC3.77□□□□□ -1.81
CDH12P55289 MTND1P3-201ENST00000484956 952 ntBASIC3.77□□□□□ -1.81
CDH12P55289 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 RPL29P14-201ENST00000495837 428 ntBASIC3.77□□□□□ -1.81
CDH12P55289 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH12P55289 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
CDH12P55289 TMEM248P1-201ENST00000510579 951 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC091133.4-201ENST00000511142 308 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC010342.1-201ENST00000514047 877 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 RNU6-201P-201ENST00000517100 61 ntBASIC3.77□□□□□ -1.81
CDH12P55289 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH12P55289 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH12P55289 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 AC107016.1-201ENST00000550463 337 ntBASIC3.77□□□□□ -1.81
CDH12P55289 EEF1B2P4-201ENST00000551398 348 ntBASIC3.77□□□□□ -1.81
CDH12P55289 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms