Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL590233.1-201ENST00000430017 456 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 AC129850.1-201ENST00000436203 508 ntBASIC3.51□□□□□ -1.85
CDH11P55287 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 KATNBL1P3-201ENST00000443475 909 ntBASIC3.51□□□□□ -1.85
CDH11P55287 EPS15P1-201ENST00000448836 336 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 SUMO2P2-201ENST00000456482 255 ntBASIC3.51□□□□□ -1.85
CDH11P55287 RPL31P3-201ENST00000458430 332 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AP001992.1-205ENST00000462248 379 ntBASIC3.51□□□□□ -1.85
CDH11P55287 TRBV12-2-201ENST00000489763 344 ntBASIC3.51□□□□□ -1.85
CDH11P55287 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 AC006499.5-201ENST00000505037 514 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 NPM1P41-201ENST00000512920 831 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC093853.1-201ENST00000515689 483 ntBASIC3.51□□□□□ -1.85
CDH11P55287 RN7SKP83-201ENST00000516512 178 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 AC022861.1-201ENST00000522981 663 ntBASIC3.51□□□□□ -1.85
CDH11P55287 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH11P55287 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 AC135279.1-201ENST00000543493 504 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 AC012414.6-201ENST00000568241 401 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 NBR2-204ENST00000587322 63 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC040904.1-201ENST00000590850 223 ntBASIC3.51□□□□□ -1.85
CDH11P55287 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH11P55287 AP000403.1-201ENST00000603349 851 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AL009028.1-201ENST00000604895 802 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AL390208.1-201ENST00000605885 644 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
CDH11P55287 AC107214.2-201ENST00000608204 634 ntBASIC3.51□□□□□ -1.85
CDH11P55287 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.51□□□□□ -1.85
CDH11P55287 MIR6868-201ENST00000611215 58 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH11P55287 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 AC097714.1-201ENST00000511272 1647 ntBASIC3.51□□□□□ -1.85
CDH11P55287 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 CR383658.2-201ENST00000547576 1525 ntBASIC3.5□□□□□ -1.85
CDH11P55287 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH11P55287 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDH11P55287 Y_RNA.97-201ENST00000363094 102 ntBASIC3.5□□□□□ -1.85
CDH11P55287 SNORA62.3-201ENST00000365110 153 ntBASIC3.5□□□□□ -1.85
CDH11P55287 MIR23B-201ENST00000384832 97 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AL031679.1-201ENST00000400616 525 ntBASIC3.5□□□□□ -1.85
CDH11P55287 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH11P55287 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 RSU1P2-202ENST00000437884 485 ntBASIC3.5□□□□□ -1.85
CDH11P55287 SNRPEP7-201ENST00000438350 220 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LSM1P1-201ENST00000438629 273 ntBASIC3.5□□□□□ -1.85
CDH11P55287 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
CDH11P55287 Z95327.1-201ENST00000446082 482 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AC002381.1-201ENST00000447049 280 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH11P55287 HMGN2P7-201ENST00000456186 273 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH11P55287 SNORA84-201ENST00000459229 133 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH11P55287 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH11P55287 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 SAP18P1-201ENST00000512058 390 ntBASIC3.5□□□□□ -1.85
CDH11P55287 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH11P55287 AC060788.1-201ENST00000521318 469 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AL139174.1-201ENST00000531489 886 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AL121766.1-201ENST00000547436 487 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AC091516.1-201ENST00000549191 703 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.5□□□□□ -1.85
CDH11P55287 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH11P55287 ACTR3BP3-201ENST00000565577 979 ntBASIC3.5□□□□□ -1.85
CDH11P55287 AC006130.2-201ENST00000586202 326 ntBASIC3.5□□□□□ -1.85
CDH11P55287 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH11P55287 AL592436.1-201ENST00000605135 558 ntBASIC3.5□□□□□ -1.85
CDH11P55287 BCRP9-201ENST00000605312 388 ntBASIC3.5□□□□□ -1.85
CDH11P55287 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.5□□□□□ -1.85
CDH11P55287 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDH11P55287 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.5□□□□□ -1.85
CDH11P55287 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH11P55287 AC068137.4-201ENST00000638485 296 ntBASIC3.5□□□□□ -1.85
CDH11P55287 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH11P55287 AL356473.1-201ENST00000406203 1408 ntBASIC3.5□□□□□ -1.85
CDH11P55287 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH11P55287 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms