Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL7P38-201ENST00000488396 739 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 AC010625.1-201ENST00000511296 403 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC010587.2-201ENST00000511727 448 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 IGHV3-76-201ENST00000522465 295 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 OR5AK1P-201ENST00000524837 922 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMK1P53667 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMK1P53667 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMK1P53667 MIR3186-201ENST00000577404 85 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 SNORD84-203ENST00000584275 78 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMK1P53667 AL109653.1-201ENST00000603091 248 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RPL23AP92-201ENST00000603609 255 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL158042.1-201ENST00000605338 460 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 YPEL5P2-201ENST00000605553 359 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC013244.3-201ENST00000605614 388 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC128687.2-201ENST00000609657 566 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL355816.2-201ENST00000610049 647 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL355365.1-201ENST00000616480 294 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC092628.2-201ENST00000622492 339 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC073530.2-201ENST00000623987 261 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL773545.4-201ENST00000637262 310 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMK1P53667 AC006927.4-201ENST00000639187 543 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL513478.4-201ENST00000641636 310 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMK1P53667 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LIMK1P53667 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LIMK1P53667 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 AL390862.1-201ENST00000635467 1469 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIMK1P53667 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 RNU6-1249P-201ENST00000363237 111 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 MIR490-201ENST00000384865 128 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LIMK1P53667 RHEBP3-201ENST00000411920 351 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 HIGD1AP15-201ENST00000416198 280 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMK1P53667 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.74□□□□□ -1.81
LIMK1P53667 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 PSMA6P3-201ENST00000428242 164 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 AC073063.1-201ENST00000434352 607 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMK1P53667 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 SETD6P1-201ENST00000444575 317 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 ARPC3P2-201ENST00000457786 533 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC026410.2-201ENST00000460281 156 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC008481.1-201ENST00000463278 396 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.74□□□□□ -1.81
LIMK1P53667 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.74□□□□□ -1.81
LIMK1P53667 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 AC114981.1-201ENST00000503897 678 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC006390.1-201ENST00000508068 283 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.74□□□□□ -1.81
LIMK1P53667 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 AC007458.1-201ENST00000542812 373 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 NCAPGP2-201ENST00000557911 754 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMK1P53667 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AC018755.4-201ENST00000619715 454 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 AP000484.1-201ENST00000620067 1252 ntBASIC3.74□□□□□ -1.81
LIMK1P53667 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMK1P53667 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMK1P53667 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIMK1P53667 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIMK1P53667 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.74□□□□□ -1.81
LIMK1P53667 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMK1P53667 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMK1P53667 MIR199A2-201ENST00000385289 110 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 MIR1284-201ENST00000408337 120 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 MIR1251-201ENST00000408552 70 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 AL008987.1-201ENST00000415528 237 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 AL512649.1-201ENST00000428997 581 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AP000563.1-201ENST00000490865 758 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms