Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL7P12-201ENST00000446719 750 ntBASIC2.63□□□□□ -1.99
NUP98P52948 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.63□□□□□ -1.99
NUP98P52948 AC005912.1-201ENST00000495392 255 ntBASIC2.63□□□□□ -1.99
NUP98P52948 MIR5002-201ENST00000584713 97 ntBASIC2.63□□□□□ -1.99
NUP98P52948 RNA5SP108-201ENST00000605921 117 ntBASIC2.63□□□□□ -1.99
NUP98P52948 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.63□□□□□ -1.99
NUP98P52948 AC105429.2-201ENST00000610567 517 ntBASIC2.63□□□□□ -1.99
NUP98P52948 AF127577.6-201ENST00000623352 2191 ntBASIC2.63□□□□□ -1.99
NUP98P52948 SNORA31-201ENST00000362607 130 ntBASIC2.63□□□□□ -1.99
NUP98P52948 RNU6-356P-201ENST00000384140 107 ntBASIC2.63□□□□□ -1.99
NUP98P52948 RPL23AP44-201ENST00000482216 473 ntBASIC2.63□□□□□ -1.99
NUP98P52948 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.63□□□□□ -1.99
NUP98P52948 AC068339.2-201ENST00000534395 618 ntBASIC2.63□□□□□ -1.99
NUP98P52948 AC011494.1-201ENST00000596454 237 ntBASIC2.63□□□□□ -1.99
NUP98P52948 RPL23AP61-201ENST00000623642 466 ntBASIC2.63□□□□□ -1.99
NUP98P52948 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NUP98P52948 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUP98P52948 AC117529.2-201ENST00000512159 2068 ntBASIC2.62□□□□□ -1.99
NUP98P52948 ZNF33CP-201ENST00000432492 2030 ntBASIC2.62□□□□□ -1.99
NUP98P52948 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUP98P52948 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUP98P52948 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NUP98P52948 MTND4P11-201ENST00000417020 1058 ntBASIC2.62□□□□□ -1.99
NUP98P52948 AL353898.1-201ENST00000444055 238 ntBASIC2.62□□□□□ -1.99
NUP98P52948 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.62□□□□□ -1.99
NUP98P52948 MTND5P21-201ENST00000531961 522 ntBASIC2.62□□□□□ -1.99
NUP98P52948 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP98P52948 OR6C73P-201ENST00000546432 358 ntBASIC2.62□□□□□ -1.99
NUP98P52948 AC025260.1-201ENST00000548858 430 ntBASIC2.62□□□□□ -1.99
NUP98P52948 AC012531.5-201ENST00000611375 151 ntBASIC2.62□□□□□ -1.99
NUP98P52948 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NUP98P52948 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUP98P52948 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP98P52948 AP001148.1-201ENST00000624124 2359 ntBASIC2.61□□□□□ -1.99
NUP98P52948 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUP98P52948 RNU6-317P-201ENST00000384031 107 ntBASIC2.61□□□□□ -1.99
NUP98P52948 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP98P52948 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP98P52948 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.61□□□□□ -1.99
NUP98P52948 RPL21P103-201ENST00000479921 488 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP98P52948 RNU4-60P-201ENST00000517239 135 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP98P52948 AC104237.2-201ENST00000612456 443 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC092650.2-201ENST00000619984 902 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AP003072.4-201ENST00000624580 310 ntBASIC2.61□□□□□ -1.99
NUP98P52948 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
NUP98P52948 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
NUP98P52948 AL512646.1-201ENST00000269395 1077 ntBASIC2.61□□□□□ -1.99
NUP98P52948 RNA5SP189-201ENST00000364920 115 ntBASIC2.61□□□□□ -1.99
NUP98P52948 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP98P52948 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP98P52948 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP98P52948 AC092451.1-201ENST00000480211 153 ntBASIC2.61□□□□□ -1.99
NUP98P52948 MTCO1P30-201ENST00000515244 580 ntBASIC2.61□□□□□ -1.99
NUP98P52948 PTP4A1P6-201ENST00000531034 478 ntBASIC2.61□□□□□ -1.99
NUP98P52948 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.61□□□□□ -1.99
NUP98P52948 NF1P5-201ENST00000588287 448 ntBASIC2.61□□□□□ -1.99
NUP98P52948 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.61□□□□□ -1.99
NUP98P52948 AC116563.2-201ENST00000624751 535 ntBASIC2.61□□□□□ -1.99
NUP98P52948 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NUP98P52948 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NUP98P52948 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NUP98P52948 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 AC096656.1-201ENST00000623826 1364 ntBASIC2.6□□□□□ -1.99
NUP98P52948 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NUP98P52948 ATP5F1P6-201ENST00000402768 767 ntBASIC2.6□□□□□ -1.99
NUP98P52948 MORF4L1P6-201ENST00000418771 268 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AL445646.1-201ENST00000431784 216 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AC129850.1-201ENST00000436203 508 ntBASIC2.6□□□□□ -1.99
NUP98P52948 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP98P52948 OR6C72P-201ENST00000451403 892 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AL049830.2-201ENST00000480072 201 ntBASIC2.6□□□□□ -1.99
NUP98P52948 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP98P52948 CCNHP1-201ENST00000513311 678 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.6□□□□□ -1.99
NUP98P52948 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.6□□□□□ -1.99
NUP98P52948 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AP000889.2-201ENST00000532684 490 ntBASIC2.6□□□□□ -1.99
NUP98P52948 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP98P52948 AL589935.2-201ENST00000616471 1231 ntBASIC2.6□□□□□ -1.99
NUP98P52948 YWHAEP7-203ENST00000622054 312 ntBASIC2.6□□□□□ -1.99
NUP98P52948 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.6□□□□□ -1.99
NUP98P52948 AC022031.1-201ENST00000585985 2593 ntBASIC2.6□□□□□ -1.99
NUP98P52948 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NUP98P52948 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
NUP98P52948 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
NUP98P52948 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUP98P52948 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUP98P52948 MIR153-1-201ENST00000384914 90 ntBASIC2.59□□□□□ -1.99
NUP98P52948 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP98P52948 RPL7P52-201ENST00000449200 742 ntBASIC2.59□□□□□ -1.99
NUP98P52948 TRAV31-201ENST00000502780 342 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms