Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCA4P51532 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCA4P51532 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCA4P51532 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCA4P51532 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCA4P51532 MIR6073-201ENST00000352083 89 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 MIR518E-201ENST00000385252 88 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 RNA5SP270-201ENST00000411361 118 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCA4P51532 SNRPGP9-201ENST00000456025 225 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 RPS29P11-201ENST00000496507 171 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 MIR3683-201ENST00000580847 82 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCA4P51532 AC084035.1-201ENST00000634543 607 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 AC132825.8-201ENST00000640783 297 ntBASIC3.62□□□□□ -1.83
SMARCA4P51532 U8.10-201ENST00000384260 133 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCA4P51532 AIMP1P1-201ENST00000418670 937 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 USP9YP8-201ENST00000441913 500 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.61□□□□□ -1.83
SMARCA4P51532 AC017007.3-201ENST00000479865 435 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.61□□□□□ -1.83
SMARCA4P51532 RPAP2P1-201ENST00000603626 1168 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.6-201ENST00000603753 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.11-201ENST00000604059 253 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.10-201ENST00000604330 253 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AC008162.1-201ENST00000604718 254 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.1-201ENST00000604752 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.2-201ENST00000604983 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.5-201ENST00000605253 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.4-201ENST00000605279 254 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.12-201ENST00000605291 253 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.8-201ENST00000605353 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.9-201ENST00000605428 253 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 AL670379.7-201ENST00000605823 252 ntBASIC3.61□□□□□ -1.83
SMARCA4P51532 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA4P51532 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA4P51532 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA4P51532 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA4P51532 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA4P51532 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.6□□□□□ -1.83
SMARCA4P51532 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA4P51532 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCA4P51532 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCA4P51532 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 AC245517.4-201ENST00000448601 281 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 AL645939.1-201ENST00000453429 797 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCA4P51532 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.6□□□□□ -1.83
SMARCA4P51532 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCA4P51532 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCA4P51532 AL359821.1-201ENST00000605519 182 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 Y_RNA.783-201ENST00000613546 102 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 AC092650.2-201ENST00000619984 902 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.6□□□□□ -1.83
SMARCA4P51532 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SMARCA4P51532 MIR378A-201ENST00000362177 66 ntBASIC3.59□□□□□ -1.83
SMARCA4P51532 NDUFB4P5-201ENST00000415445 361 ntBASIC3.59□□□□□ -1.83
SMARCA4P51532 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCA4P51532 AC012498.1-201ENST00000424037 437 ntBASIC3.59□□□□□ -1.83
SMARCA4P51532 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
SMARCA4P51532 SDR42E1P3-201ENST00000438345 502 ntBASIC3.59□□□□□ -1.83
SMARCA4P51532 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCA4P51532 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCA4P51532 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCA4P51532 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
SMARCA4P51532 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMARCA4P51532 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMARCA4P51532 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMARCA4P51532 RNU6-661P-201ENST00000362409 107 ntBASIC3.59□□□□□ -1.84
SMARCA4P51532 SAR1AP2-201ENST00000392696 594 ntBASIC3.59□□□□□ -1.84
SMARCA4P51532 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.59□□□□□ -1.84
SMARCA4P51532 AC093909.5-201ENST00000621839 1799 ntBASIC3.58□□□□□ -1.84
SMARCA4P51532 RNY1P10-201ENST00000363268 113 ntBASIC3.58□□□□□ -1.84
SMARCA4P51532 Y_RNA.116-201ENST00000363292 103 ntBASIC3.58□□□□□ -1.84
SMARCA4P51532 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCA4P51532 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
SMARCA4P51532 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCA4P51532 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCA4P51532 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCA4P51532 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCA4P51532 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCA4P51532 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCA4P51532 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCA4P51532 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCA4P51532 AL445669.2-201ENST00000454425 421 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 AL049830.2-201ENST00000480072 201 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 RNU6-1334P-201ENST00000516032 105 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 NDUFA5P6-201ENST00000542110 379 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCA4P51532 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMARCA4P51532 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCA4P51532 FAM35CP-201ENST00000554755 2470 ntBASIC3.57□□□□□ -1.84
SMARCA4P51532 MIR499A-201ENST00000384903 122 ntBASIC3.56□□□□□ -1.84
SMARCA4P51532 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCA4P51532 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCA4P51532 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCA4P51532 AC092185.1-201ENST00000491371 97 ntBASIC3.56□□□□□ -1.84
SMARCA4P51532 AC025260.1-201ENST00000548858 430 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms