Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 SNORA70E-201ENST00000384492 135 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 SKINT1L-201ENST00000401057 817 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL12P48061 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL12P48061 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL12P48061 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL12P48061 RPL21P112-201ENST00000434403 463 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AP000949.1-201ENST00000438328 629 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC092754.2-201ENST00000463506 460 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 RPL21P18-201ENST00000469899 480 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC092185.1-201ENST00000491371 97 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL12P48061 ANXA2P1-201ENST00000505539 926 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.77□□□□□ -1.97
CXCL12P48061 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL12P48061 PRELID3BP4-201ENST00000515476 571 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL12P48061 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL12P48061 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.77□□□□□ -1.97
CXCL12P48061 AC004217.3-201ENST00000551552 878 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC074029.1-201ENST00000552531 1044 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC010735.1-201ENST00000567305 1026 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL12P48061 MIR4524B-201ENST00000581569 115 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.77□□□□□ -1.97
CXCL12P48061 AC133794.1-201ENST00000602731 914 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC121761.2-201ENST00000617300 689 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CXCL12P48061 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL12P48061 AC073055.1-201ENST00000456901 1621 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CXCL12P48061 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CXCL12P48061 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CXCL12P48061 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL12P48061 AC025263.3-201ENST00000622965 1396 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL12P48061 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL12P48061 DSTNP4-201ENST00000399472 474 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 BTBD10P2-201ENST00000404779 676 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 RPL31P12-201ENST00000422587 358 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL12P48061 AL009174.1-201ENST00000426577 416 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 TRIAP1P1-201ENST00000427062 225 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.76□□□□□ -1.97
CXCL12P48061 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL12P48061 UBE2D3P1-201ENST00000436669 444 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL12P48061 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL12P48061 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL12P48061 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXCL12P48061 AC016065.2-201ENST00000514530 444 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 SNORA64.4-201ENST00000516632 81 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC104027.1-201ENST00000521887 300 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 EEF1A1P37-201ENST00000522748 715 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL12P48061 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL12P48061 AC010198.2-201ENST00000550612 259 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.76□□□□□ -1.97
CXCL12P48061 AL163153.1-201ENST00000554223 283 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 OR4H12P-201ENST00000556269 907 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AL020997.3-201ENST00000602843 359 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 YWHAQP7-201ENST00000603536 658 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC078880.5-201ENST00000617845 421 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC068880.4-201ENST00000623082 495 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC006065.5-201ENST00000623427 349 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CXCL12P48061 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CXCL12P48061 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.76□□□□□ -1.97
CXCL12P48061 ZNF33CP-201ENST00000432492 2030 ntBASIC2.76□□□□□ -1.97
CXCL12P48061 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL12P48061 SNORA63.3-201ENST00000362682 132 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 U3.11-201ENST00000364476 212 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.75□□□□□ -1.97
CXCL12P48061 U6.112-201ENST00000384129 70 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 RNU6-1151P-201ENST00000384684 107 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
CXCL12P48061 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL12P48061 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL12P48061 RNU7-140P-201ENST00000459546 60 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.75□□□□□ -1.97
CXCL12P48061 RPL7P5-201ENST00000471472 736 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC092902.1-201ENST00000486999 259 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 NAMPTP2-201ENST00000505629 1115 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC008549.1-201ENST00000512900 643 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 MTND1P36-201ENST00000522384 936 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC092451.2-201ENST00000538746 658 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.75□□□□□ -1.97
CXCL12P48061 MIR4504-201ENST00000577413 92 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms