Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-885P-201ENST00000516607 104 ntBASIC3.28□□□□□ -1.88
SSR1P43307 SNORA31.15-201ENST00000516771 132 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC245389.1-201ENST00000605141 529 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC124312.4-201ENST00000605533 310 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC009570.1-201ENST00000609599 745 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC040168.1-201ENST00000623594 991 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC103798.2-201ENST00000624292 632 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AL356094.1-201ENST00000624663 1212 ntBASIC3.28□□□□□ -1.88
SSR1P43307 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.28□□□□□ -1.88
SSR1P43307 U6.105-201ENST00000637379 88 ntBASIC3.28□□□□□ -1.88
SSR1P43307 BX649567.1-201ENST00000642071 1134 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
SSR1P43307 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSR1P43307 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSR1P43307 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSR1P43307 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSR1P43307 RNA5SP393-201ENST00000363423 117 ntBASIC3.27□□□□□ -1.89
SSR1P43307 MIR449B-201ENST00000384995 97 ntBASIC3.27□□□□□ -1.89
SSR1P43307 MIR16-1-201ENST00000385271 89 ntBASIC3.27□□□□□ -1.89
SSR1P43307 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.27□□□□□ -1.89
SSR1P43307 ARF4P3-201ENST00000397387 509 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AL136133.1-201ENST00000413694 376 ntBASIC3.27□□□□□ -1.89
SSR1P43307 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 HSFY1P1-201ENST00000423928 1178 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
SSR1P43307 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.27□□□□□ -1.89
SSR1P43307 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 UQCRHP3-201ENST00000451503 251 ntBASIC3.27□□□□□ -1.89
SSR1P43307 RN7SL863P-201ENST00000462370 296 ntBASIC3.27□□□□□ -1.89
SSR1P43307 RPL30P14-201ENST00000482744 348 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
SSR1P43307 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SSR1P43307 AC027338.1-201ENST00000514840 825 ntBASIC3.27□□□□□ -1.89
SSR1P43307 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.27□□□□□ -1.89
SSR1P43307 AC006518.2-201ENST00000542513 940 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC126177.3-201ENST00000551839 688 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC074051.3-201ENST00000570238 358 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.27□□□□□ -1.89
SSR1P43307 AL513477.2-201ENST00000607858 568 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AP005229.2-201ENST00000609980 697 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC100793.4-201ENST00000613683 429 ntBASIC3.27□□□□□ -1.89
SSR1P43307 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.27□□□□□ -1.89
SSR1P43307 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
SSR1P43307 AC015967.1-201ENST00000619893 476 ntBASIC3.27□□□□□ -1.89
SSR1P43307 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.27□□□□□ -1.89
SSR1P43307 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
SSR1P43307 SGO1P1-201ENST00000603525 1447 ntBASIC3.27□□□□□ -1.89
SSR1P43307 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
SSR1P43307 AL512283.1-201ENST00000606756 1384 ntBASIC3.26□□□□□ -1.89
SSR1P43307 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSR1P43307 AC011460.1-201ENST00000636268 1834 ntBASIC3.26□□□□□ -1.89
SSR1P43307 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSR1P43307 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.26□□□□□ -1.89
SSR1P43307 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SSR1P43307 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSR1P43307 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.26□□□□□ -1.89
SSR1P43307 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
SSR1P43307 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
SSR1P43307 MIR183-201ENST00000384958 110 ntBASIC3.26□□□□□ -1.89
SSR1P43307 MIR670-201ENST00000390142 98 ntBASIC3.26□□□□□ -1.89
SSR1P43307 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AC092638.1-201ENST00000411966 1275 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AC092447.6-201ENST00000414578 210 ntBASIC3.26□□□□□ -1.89
SSR1P43307 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.26□□□□□ -1.89
SSR1P43307 AL096829.2-201ENST00000446582 742 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AP002812.1-201ENST00000495378 474 ntBASIC3.26□□□□□ -1.89
SSR1P43307 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.26□□□□□ -1.89
SSR1P43307 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSR1P43307 AC010625.1-201ENST00000511296 403 ntBASIC3.26□□□□□ -1.89
SSR1P43307 RN7SKP40-201ENST00000517211 242 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AL391156.1-201ENST00000554965 554 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.26□□□□□ -1.89
SSR1P43307 ZNF971P-201ENST00000562068 1249 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.26□□□□□ -1.89
SSR1P43307 GLUD1P4-201ENST00000590914 418 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AL606834.2-201ENST00000602954 668 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AC024560.3-201ENST00000608482 349 ntBASIC3.26□□□□□ -1.89
SSR1P43307 MIR6798-201ENST00000612887 67 ntBASIC3.26□□□□□ -1.89
SSR1P43307 AC092650.2-201ENST00000619984 902 ntBASIC3.26□□□□□ -1.89
SSR1P43307 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SSR1P43307 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
SSR1P43307 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
SSR1P43307 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.26□□□□□ -1.89
SSR1P43307 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.26□□□□□ -1.89
SSR1P43307 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSR1P43307 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSR1P43307 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSR1P43307 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNU6-619P-201ENST00000365146 108 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNU6-354P-201ENST00000383862 107 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNU6-610P-201ENST00000384264 107 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNU6-932P-201ENST00000391108 106 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNA5SP252-201ENST00000391131 119 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AP002784.2-201ENST00000397300 549 ntBASIC3.25□□□□□ -1.89
SSR1P43307 MTND4LP20-201ENST00000402379 270 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms