Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 SNORA31.1-201ENST00000515993 133 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 SNORA31.5-201ENST00000516190 133 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA1P38398 AP001317.1-201ENST00000531194 960 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCA1P38398 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 SEPT7P7-201ENST00000420492 1301 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCA1P38398 AL024474.1-201ENST00000404655 591 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 LINC01347-201ENST00000417964 355 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.05□□□□□ -1.92
BRCA1P38398 AC107222.1-201ENST00000510899 637 ntBASIC3.05□□□□□ -1.92
BRCA1P38398 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.05□□□□□ -1.92
BRCA1P38398 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
BRCA1P38398 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
BRCA1P38398 MTATP6P31-201ENST00000406985 692 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 MTND3P20-201ENST00000407663 186 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 MIR1250-201ENST00000408098 113 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AC069218.2-201ENST00000411665 344 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA1P38398 MORF4L1P6-201ENST00000418771 268 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.04□□□□□ -1.92
BRCA1P38398 FABP5P3-201ENST00000437960 408 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 DYNLL1P6-201ENST00000503440 264 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 SNORA9.3-201ENST00000516383 129 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AC004923.2-201ENST00000529649 369 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.04□□□□□ -1.92
BRCA1P38398 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA1P38398 AL355836.1-201ENST00000555951 870 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.04□□□□□ -1.92
BRCA1P38398 AC091488.1-201ENST00000604239 660 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 AC100814.1-201ENST00000606963 623 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 CRYM-AS1-204ENST00000637983 556 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.04□□□□□ -1.92
BRCA1P38398 EXOC5P1-201ENST00000510543 1969 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 ADAM3A-203ENST00000461344 2157 ntBASIC3.04□□□□□ -1.92
BRCA1P38398 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BRCA1P38398 MTND5P6-201ENST00000422338 1798 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 SNORD6-201ENST00000365444 73 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 GSTA9P-201ENST00000406231 611 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 RNU2-21P-201ENST00000410368 188 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 RNU6-77P-201ENST00000410554 91 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 XKRYP4-201ENST00000414395 483 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 CR848007.2-201ENST00000424918 787 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 VDAC1P3-201ENST00000434069 851 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 XKRYP5-201ENST00000449659 483 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.03□□□□□ -1.92
BRCA1P38398 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.03□□□□□ -1.92
BRCA1P38398 AP003717.3-201ENST00000544832 1180 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.03□□□□□ -1.92
BRCA1P38398 AP001004.1-201ENST00000582468 324 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 SNRPGP15-201ENST00000600149 222 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 AL109659.3-201ENST00000624985 950 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 AL157700.1-201ENST00000561973 1432 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.03□□□□□ -1.92
BRCA1P38398 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BRCA1P38398 Y_RNA.595-201ENST00000410403 105 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 UBE2V1P11-201ENST00000411559 285 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 AC097499.1-201ENST00000444277 208 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.93
BRCA1P38398 NPM1P49-201ENST00000448027 714 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.03□□□□□ -1.93
BRCA1P38398 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.03□□□□□ -1.93
BRCA1P38398 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.03□□□□□ -1.93
BRCA1P38398 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
BRCA1P38398 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 AC108860.1-201ENST00000484521 383 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 RPL36AP51-201ENST00000487216 318 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.03□□□□□ -1.93
BRCA1P38398 SNORA70.14-201ENST00000516205 110 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 AC083923.1-201ENST00000523708 376 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 AC018630.1-201ENST00000541376 925 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.93
BRCA1P38398 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 KATNBL1P5-201ENST00000605015 517 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 MIR6845-201ENST00000613182 61 ntBASIC3.03□□□□□ -1.93
BRCA1P38398 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.03□□□□□ -1.93
BRCA1P38398 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BRCA1P38398 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA1P38398 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.02□□□□□ -1.93
BRCA1P38398 RNU6-650P-201ENST00000365658 111 ntBASIC3.02□□□□□ -1.93
BRCA1P38398 AC010385.1-201ENST00000412374 256 ntBASIC3.02□□□□□ -1.93
BRCA1P38398 AC244098.2-201ENST00000422068 99 ntBASIC3.02□□□□□ -1.93
BRCA1P38398 AL592045.1-201ENST00000429867 352 ntBASIC3.02□□□□□ -1.93
BRCA1P38398 YWHAZP8-201ENST00000436935 731 ntBASIC3.02□□□□□ -1.93
BRCA1P38398 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms