Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC093424.1-201ENST00000604999 338 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AL158042.1-201ENST00000605338 460 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AC080013.3-201ENST00000606839 578 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AC107294.1-201ENST00000609524 467 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AC006329.2-201ENST00000611491 394 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AC011330.2-201ENST00000621680 635 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 AC231657.1-201ENST00000624313 397 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 MTND2P41-201ENST00000637599 773 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 CEP170P1-201ENST00000502249 4587 ntBASIC4.14□□□□□ -1.75
TM4SF1P30408 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF1P30408 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF1P30408 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF1P30408 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TM4SF1P30408 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.14□□□□□ -1.75
TM4SF1P30408 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.13□□□□□ -1.75
TM4SF1P30408 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 SNORA5B-201ENST00000363786 132 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 RNU6-7-201ENST00000364784 107 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 RNU6-8-201ENST00000365467 107 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.13□□□□□ -1.75
TM4SF1P30408 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TM4SF1P30408 MIR1284-201ENST00000408337 120 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AC068533.2-201ENST00000411872 306 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.13□□□□□ -1.75
TM4SF1P30408 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.13□□□□□ -1.75
TM4SF1P30408 AC006989.1-201ENST00000427212 131 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 RPL18AP17-201ENST00000455326 198 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 RPS20P32-201ENST00000456044 356 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 XKRY-201ENST00000510392 1100 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.13□□□□□ -1.75
TM4SF1P30408 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
TM4SF1P30408 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.13□□□□□ -1.75
TM4SF1P30408 AC010653.1-201ENST00000571108 881 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AC008638.3-201ENST00000603341 463 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 HMGN2P28-201ENST00000606102 262 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AL713922.2-201ENST00000619384 716 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF1P30408 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.13□□□□□ -1.75
TM4SF1P30408 AP000776.1-201ENST00000530032 1663 ntBASIC4.13□□□□□ -1.75
TM4SF1P30408 AL356473.1-201ENST00000406203 1408 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TM4SF1P30408 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM4SF1P30408 RNU6-263P-201ENST00000363811 107 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AL603766.1-201ENST00000407763 664 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 RNU4-78P-201ENST00000410940 126 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 FNDC3CP-201ENST00000420795 1155 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 GLRXP1-201ENST00000423261 334 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.12□□□□□ -1.75
TM4SF1P30408 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.12□□□□□ -1.75
TM4SF1P30408 FGF7P5-201ENST00000441829 291 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
TM4SF1P30408 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.12□□□□□ -1.75
TM4SF1P30408 snoU13.3-201ENST00000459441 104 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 RPL21P8-201ENST00000465083 535 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AC022795.1-201ENST00000473808 480 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.12□□□□□ -1.75
TM4SF1P30408 RN7SKP287-201ENST00000516546 266 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 OR5AK1P-201ENST00000524837 922 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AP002404.1-201ENST00000532005 451 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.12□□□□□ -1.75
TM4SF1P30408 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.12□□□□□ -1.75
TM4SF1P30408 MAGOH2P-202ENST00000584384 429 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.12□□□□□ -1.75
TM4SF1P30408 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.12□□□□□ -1.75
TM4SF1P30408 AL592221.1-201ENST00000605266 382 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.12□□□□□ -1.75
TM4SF1P30408 AP000484.1-201ENST00000620067 1252 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AL590240.3-201ENST00000621416 943 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AC138649.5-201ENST00000637456 137 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 AC018555.1-201ENST00000567548 1980 ntBASIC4.12□□□□□ -1.75
TM4SF1P30408 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TM4SF1P30408 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM4SF1P30408 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM4SF1P30408 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM4SF1P30408 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 Y_RNA.408-201ENST00000383987 102 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 SNORA7.4-201ENST00000384249 137 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AC006548.1-201ENST00000427470 102 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.11□□□□□ -1.75
TM4SF1P30408 SKP1P1-201ENST00000438081 489 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TM4SF1P30408 USP9YP34-201ENST00000453983 808 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms