Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.28□□□□□ -1.88
SHC1P29353 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 SETP14-201ENST00000497538 873 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 FTH1P9-201ENST00000513251 355 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC022447.1-201ENST00000515358 464 ntBASIC3.28□□□□□ -1.88
SHC1P29353 Y_RNA.695-201ENST00000516715 107 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC106038.2-201ENST00000520706 568 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.28□□□□□ -1.88
SHC1P29353 OR7K1P-201ENST00000546439 926 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 RNA5SP108-201ENST00000605921 117 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC008443.7-201ENST00000622195 246 ntBASIC3.28□□□□□ -1.88
SHC1P29353 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHC1P29353 AC092656.1-203ENST00000624134 423 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC034229.5-201ENST00000624258 185 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 RIOK3P1-201ENST00000418778 1528 ntBASIC3.28□□□□□ -1.88
SHC1P29353 NMD3P1-201ENST00000439704 1488 ntBASIC3.28□□□□□ -1.88
SHC1P29353 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.89
SHC1P29353 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SHC1P29353 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
SHC1P29353 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 OR5H15-201ENST00000383696 930 ntBASIC3.27□□□□□ -1.89
SHC1P29353 SNORA51.12-201ENST00000384448 134 ntBASIC3.27□□□□□ -1.89
SHC1P29353 SNORA70E-201ENST00000384492 135 ntBASIC3.27□□□□□ -1.89
SHC1P29353 RNU6-1151P-201ENST00000384684 107 ntBASIC3.27□□□□□ -1.89
SHC1P29353 Y_RNA.559-201ENST00000384686 107 ntBASIC3.27□□□□□ -1.89
SHC1P29353 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
SHC1P29353 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 NUP35P2-201ENST00000416748 943 ntBASIC3.27□□□□□ -1.89
SHC1P29353 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 AC092832.1-201ENST00000422934 400 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AL513175.1-201ENST00000431492 780 ntBASIC3.27□□□□□ -1.89
SHC1P29353 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 MTCYBP39-201ENST00000437562 491 ntBASIC3.27□□□□□ -1.89
SHC1P29353 MTND4P6-201ENST00000438297 472 ntBASIC3.27□□□□□ -1.89
SHC1P29353 RPS24P1-201ENST00000438550 371 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 SNRPGP5-201ENST00000456003 220 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.27□□□□□ -1.89
SHC1P29353 AC072039.1-201ENST00000477611 581 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC109486.1-201ENST00000486833 374 ntBASIC3.27□□□□□ -1.89
SHC1P29353 FCF1P3-201ENST00000496394 590 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC104685.1-201ENST00000502445 371 ntBASIC3.27□□□□□ -1.89
SHC1P29353 SNX5P1-201ENST00000505757 1041 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 HMGN1P11-201ENST00000508668 303 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC093281.2-201ENST00000510153 597 ntBASIC3.27□□□□□ -1.89
SHC1P29353 ARL2BPP6-201ENST00000512757 439 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 AL117351.2-201ENST00000513571 157 ntBASIC3.27□□□□□ -1.89
SHC1P29353 Vault.1-201ENST00000516474 102 ntBASIC3.27□□□□□ -1.89
SHC1P29353 RN7SKP60-201ENST00000516985 239 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.27□□□□□ -1.89
SHC1P29353 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 AF279873.1-201ENST00000523393 313 ntBASIC3.27□□□□□ -1.89
SHC1P29353 MTCYBP20-201ENST00000524239 1129 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 MIR3158-1-201ENST00000583596 81 ntBASIC3.27□□□□□ -1.89
SHC1P29353 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 AC080078.2-201ENST00000603766 501 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 AC024560.3-201ENST00000608482 349 ntBASIC3.27□□□□□ -1.89
SHC1P29353 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 AC245297.2-201ENST00000610119 565 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC104073.3-201ENST00000610942 955 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC006133.1-201ENST00000617106 264 ntBASIC3.27□□□□□ -1.89
SHC1P29353 AC009878.1-201ENST00000621819 340 ntBASIC3.27□□□□□ -1.89
SHC1P29353 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHC1P29353 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SHC1P29353 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHC1P29353 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.27□□□□□ -1.89
SHC1P29353 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 XPOTP1-201ENST00000443317 2398 ntBASIC3.26□□□□□ -1.89
SHC1P29353 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.26□□□□□ -1.89
SHC1P29353 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHC1P29353 AC107982.1-201ENST00000507171 1300 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms