Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RXRBP28702 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
RXRBP28702 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 AL118496.1-201ENST00000440201 1812 ntBASIC5.92□□□□□ -1.46
RXRBP28702 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 AC068870.3-201ENST00000625077 2536 ntBASIC5.92□□□□□ -1.46
RXRBP28702 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RXRBP28702 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 Y_RNA.202-201ENST00000364083 110 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RNA5SP72-201ENST00000364442 117 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RNU6-331P-201ENST00000384724 107 ntBASIC5.92□□□□□ -1.46
RXRBP28702 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RXRBP28702 AL034374.1-201ENST00000406329 351 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RPL5P18-201ENST00000406671 891 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RNU2-62P-201ENST00000410868 191 ntBASIC5.92□□□□□ -1.46
RXRBP28702 MTND3P8-201ENST00000412909 339 ntBASIC5.92□□□□□ -1.46
RXRBP28702 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.92□□□□□ -1.46
RXRBP28702 ELOCP4-201ENST00000420090 333 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.92□□□□□ -1.46
RXRBP28702 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.92□□□□□ -1.46
RXRBP28702 RSU1P2-202ENST00000437884 485 ntBASIC5.92□□□□□ -1.46
RXRBP28702 GTF2IP13-201ENST00000438487 386 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RPL23AP43-201ENST00000446445 471 ntBASIC5.92□□□□□ -1.46
RXRBP28702 Y_RNA.631-201ENST00000459607 101 ntBASIC5.92□□□□□ -1.46
RXRBP28702 RN7SL197P-201ENST00000466981 299 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AL163540.1-201ENST00000485382 386 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.92□□□□□ -1.46
RXRBP28702 RNA5SP401-201ENST00000515920 127 ntBASIC5.92□□□□□ -1.46
RXRBP28702 SNORA40.12-201ENST00000516329 111 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.92□□□□□ -1.46
RXRBP28702 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.92□□□□□ -1.46
RXRBP28702 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 AC103710.3-201ENST00000608157 948 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AL161734.1-201ENST00000609720 557 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AC090425.1-201ENST00000610007 140 ntBASIC5.92□□□□□ -1.46
RXRBP28702 AC015967.1-201ENST00000619893 476 ntBASIC5.92□□□□□ -1.46
RXRBP28702 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RXRBP28702 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.92□□□□□ -1.46
RXRBP28702 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RXRBP28702 AC093311.1-201ENST00000506586 2021 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.91□□□□□ -1.46
RXRBP28702 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RXRBP28702 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.91□□□□□ -1.46
RXRBP28702 AC011155.1-201ENST00000316512 456 ntBASIC5.91□□□□□ -1.46
RXRBP28702 RPL7P26-201ENST00000333817 754 ntBASIC5.91□□□□□ -1.46
RXRBP28702 RNU1-83P-201ENST00000363426 164 ntBASIC5.91□□□□□ -1.46
RXRBP28702 MIR320B1-201ENST00000390209 79 ntBASIC5.91□□□□□ -1.46
RXRBP28702 ENSAP1-201ENST00000392855 326 ntBASIC5.91□□□□□ -1.46
RXRBP28702 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RXRBP28702 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 AC073264.1-201ENST00000411508 416 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.91□□□□□ -1.46
RXRBP28702 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.91□□□□□ -1.46
RXRBP28702 NANOGP6-201ENST00000429190 847 ntBASIC5.91□□□□□ -1.46
RXRBP28702 MTCO3P21-201ENST00000430791 643 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.91□□□□□ -1.46
RXRBP28702 IFNA20P-201ENST00000436840 528 ntBASIC5.91□□□□□ -1.46
RXRBP28702 HMGB1P18-201ENST00000438801 619 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AC006480.1-201ENST00000449887 378 ntBASIC5.91□□□□□ -1.46
RXRBP28702 NDUFA5P7-201ENST00000452914 242 ntBASIC5.91□□□□□ -1.46
RXRBP28702 PCBP2P3-201ENST00000509726 843 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.91□□□□□ -1.46
RXRBP28702 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.91□□□□□ -1.46
RXRBP28702 RNU6-123P-201ENST00000516163 102 ntBASIC5.91□□□□□ -1.46
RXRBP28702 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.91□□□□□ -1.46
RXRBP28702 PSMA2P1-201ENST00000526365 646 ntBASIC5.91□□□□□ -1.46
RXRBP28702 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RXRBP28702 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.91□□□□□ -1.46
RXRBP28702 AC093519.1-201ENST00000566109 298 ntBASIC5.91□□□□□ -1.46
RXRBP28702 MIR4742-201ENST00000581069 85 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.91□□□□□ -1.46
RXRBP28702 TPMTP1-201ENST00000592307 737 ntBASIC5.91□□□□□ -1.46
RXRBP28702 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 AP001521.1-201ENST00000609150 300 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AL442067.1-201ENST00000613261 223 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AC018926.3-201ENST00000618841 406 ntBASIC5.91□□□□□ -1.46
RXRBP28702 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.91□□□□□ -1.46
RXRBP28702 OR2L1P-202ENST00000641567 1023 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AC020633.1-201ENST00000468439 2247 ntBASIC5.91□□□□□ -1.46
RXRBP28702 AP001029.2-203ENST00000589795 4910 ntBASIC5.91□□□□□ -1.46
RXRBP28702 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RXRBP28702 MTND4P35-201ENST00000604257 1375 ntBASIC5.91□□□□□ -1.46
RXRBP28702 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RXRBP28702 NUP58P1-201ENST00000502546 1738 ntBASIC5.91□□□□□ -1.46
RXRBP28702 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms