Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 AC073587.1-201ENST00000447093 876 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 AC092967.1-201ENST00000449016 481 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 SNORD2.1-201ENST00000458762 69 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 AC010326.1-201ENST00000462726 602 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 FTH1P24-201ENST00000503502 462 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 IGLV3-6-201ENST00000523937 250 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
COL9A1P20849 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 AC100778.3-201ENST00000580060 1750 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
COL9A1P20849 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 MSL3P1-202ENST00000440028 1468 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 AC007685.1-201ENST00000329806 452 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 RNU5B-2P-201ENST00000363036 113 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 RNU6-1325P-201ENST00000364905 105 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 Y_RNA.308-201ENST00000365043 101 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.34□□□□□ -1.39
COL9A1P20849 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.34□□□□□ -1.39
COL9A1P20849 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.34□□□□□ -1.39
COL9A1P20849 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 RPL23AP2-201ENST00000471227 466 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AL122020.1-201ENST00000472287 459 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AC010409.1-201ENST00000487382 476 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 AC090617.3-201ENST00000573670 475 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 AC011476.5-201ENST00000615594 130 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.34□□□□□ -1.39
COL9A1P20849 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL9A1P20849 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COL9A1P20849 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 AC105114.1-201ENST00000624795 1862 ntBASIC6.34□□□□□ -1.39
COL9A1P20849 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL9A1P20849 AC097461.1-201ENST00000568928 2821 ntBASIC6.34□□□□□ -1.4
COL9A1P20849 AC100821.1-201ENST00000523153 2479 ntBASIC6.34□□□□□ -1.4
COL9A1P20849 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL9A1P20849 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL9A1P20849 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
COL9A1P20849 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
COL9A1P20849 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL9A1P20849 AC011455.2-201ENST00000599320 3336 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.33□□□□□ -1.4
COL9A1P20849 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL9A1P20849 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL9A1P20849 MAPK10-338ENST00000641647 3362 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 AC109446.4-201ENST00000623235 2755 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL9A1P20849 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.33□□□□□ -1.4
COL9A1P20849 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL9A1P20849 RNU5A-5P-201ENST00000411054 116 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 TOMM20P4-201ENST00000427861 435 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.33□□□□□ -1.4
COL9A1P20849 CR769767.1-201ENST00000436337 346 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 RPL7L1P1-201ENST00000448259 785 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 AC012123.2-201ENST00000485809 248 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 RPS15AP34-201ENST00000487776 387 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.33□□□□□ -1.4
COL9A1P20849 RPS27AP13-201ENST00000498403 237 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 RNY3P16-201ENST00000516338 101 ntBASIC6.33□□□□□ -1.4
COL9A1P20849 BRDTP1-201ENST00000605735 677 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms