Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC008127.2-201ENST00000549925 1075 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.22□□□□□ -1.89
XRCC1P18887 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC005332.6-201ENST00000613178 446 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC009464.1-201ENST00000615731 469 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC231759.1-201ENST00000616455 597 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC009269.6-201ENST00000621778 588 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AL445984.1-201ENST00000637834 659 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 MKKS-204ENST00000639674 192 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
XRCC1P18887 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 NUP58P1-201ENST00000502546 1738 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AP001350.1-201ENST00000601906 1524 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
XRCC1P18887 Y_RNA.25-201ENST00000362528 102 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 U3.6-201ENST00000363622 211 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 RNU6-263P-201ENST00000363811 107 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 SNORD82-201ENST00000365530 70 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 LUZP4P1-201ENST00000415420 344 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC012065.2-201ENST00000421295 375 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 TRIAP1P1-201ENST00000427062 225 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 HSFY7P-201ENST00000432672 318 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 HSFY8P-201ENST00000437934 318 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC091862.1-201ENST00000438016 1100 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.21□□□□□ -1.9
XRCC1P18887 HSFY5P-201ENST00000453726 309 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 snoU109.3-201ENST00000459477 145 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC093278.1-201ENST00000494700 600 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 RPL21P131-201ENST00000497298 483 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 MTCYBP16-201ENST00000509187 1129 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 SNORA19.3-201ENST00000516165 130 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 RN7SKP57-201ENST00000517248 293 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC091163.3-201ENST00000518269 1144 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AP001207.2-201ENST00000519490 539 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC087808.1-201ENST00000520501 361 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.21□□□□□ -1.9
XRCC1P18887 GTF2IP8-201ENST00000560687 584 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.21□□□□□ -1.9
XRCC1P18887 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AL139022.2-201ENST00000606934 443 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AL136370.1-201ENST00000608166 691 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC006023.2-201ENST00000609916 167 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC104763.3-201ENST00000613765 618 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC103798.2-201ENST00000624292 632 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC099654.8-201ENST00000637757 681 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
XRCC1P18887 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
XRCC1P18887 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 AC004925.1-201ENST00000624256 2706 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
XRCC1P18887 RNA5SP258-201ENST00000362750 119 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 RNU6-989P-201ENST00000362756 107 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 snoZ40.1-201ENST00000364540 72 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
XRCC1P18887 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
XRCC1P18887 AL357075.1-201ENST00000404107 726 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 OR4K6P-201ENST00000416478 897 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.2□□□□□ -1.9
XRCC1P18887 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.2□□□□□ -1.9
XRCC1P18887 MTCO1P53-201ENST00000441633 699 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 MTCYBP11-201ENST00000447254 1109 ntBASIC3.2□□□□□ -1.9
XRCC1P18887 AC112492.1-201ENST00000449607 712 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms