Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC023245.2-201ENST00000530760 2978 ntBASIC7.25□□□□□ -1.25
CD44P16070 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.25□□□□□ -1.25
CD44P16070 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CD44P16070 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
CD44P16070 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CD44P16070 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CD44P16070 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
CD44P16070 AC092724.1-201ENST00000624623 3397 ntBASIC7.24□□□□□ -1.25
CD44P16070 MAPK10-338ENST00000641647 3362 ntBASIC7.24□□□□□ -1.25
CD44P16070 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.24□□□□□ -1.25
CD44P16070 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.24□□□□□ -1.25
CD44P16070 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 MIR548A1-201ENST00000385041 97 ntBASIC7.24□□□□□ -1.25
CD44P16070 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.24□□□□□ -1.25
CD44P16070 RPL7AP51-201ENST00000422016 760 ntBASIC7.24□□□□□ -1.25
CD44P16070 FHP1-201ENST00000442741 703 ntBASIC7.24□□□□□ -1.25
CD44P16070 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC7.24□□□□□ -1.25
CD44P16070 AC104164.1-201ENST00000460282 590 ntBASIC7.24□□□□□ -1.25
CD44P16070 RPL7AP30-201ENST00000482859 796 ntBASIC7.24□□□□□ -1.25
CD44P16070 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC7.24□□□□□ -1.25
CD44P16070 AK3P2-201ENST00000507976 429 ntBASIC7.24□□□□□ -1.25
CD44P16070 AC093878.1-201ENST00000515630 432 ntBASIC7.24□□□□□ -1.25
CD44P16070 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.24□□□□□ -1.25
CD44P16070 AC131935.1-201ENST00000524621 333 ntBASIC7.24□□□□□ -1.25
CD44P16070 AL391261.3-201ENST00000557194 520 ntBASIC7.24□□□□□ -1.25
CD44P16070 MIR4312-201ENST00000579909 76 ntBASIC7.24□□□□□ -1.25
CD44P16070 TCL6_3.1-201ENST00000619064 137 ntBASIC7.24□□□□□ -1.25
CD44P16070 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.24□□□□□ -1.25
CD44P16070 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CD44P16070 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.24□□□□□ -1.25
CD44P16070 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC7.24□□□□□ -1.25
CD44P16070 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.23□□□□□ -1.25
CD44P16070 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.23□□□□□ -1.25
CD44P16070 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.23□□□□□ -1.25
CD44P16070 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CD44P16070 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 RNU6-228P-201ENST00000362700 106 ntBASIC7.23□□□□□ -1.25
CD44P16070 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.23□□□□□ -1.25
CD44P16070 RNU6-1296P-201ENST00000383879 107 ntBASIC7.23□□□□□ -1.25
CD44P16070 Y_RNA.534-201ENST00000384599 112 ntBASIC7.23□□□□□ -1.25
CD44P16070 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CD44P16070 RAB9AP3-201ENST00000412737 573 ntBASIC7.23□□□□□ -1.25
CD44P16070 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.23□□□□□ -1.25
CD44P16070 AL138479.1-201ENST00000426913 484 ntBASIC7.23□□□□□ -1.25
CD44P16070 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.23□□□□□ -1.25
CD44P16070 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC7.23□□□□□ -1.25
CD44P16070 RAB9AP1-201ENST00000449393 573 ntBASIC7.23□□□□□ -1.25
CD44P16070 NDUFB5P1-201ENST00000508134 564 ntBASIC7.23□□□□□ -1.25
CD44P16070 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC7.23□□□□□ -1.25
CD44P16070 SCARNA5-201ENST00000516201 276 ntBASIC7.23□□□□□ -1.25
CD44P16070 RNU6-966P-201ENST00000516479 104 ntBASIC7.23□□□□□ -1.25
CD44P16070 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.23□□□□□ -1.25
CD44P16070 RMST_6.1-201ENST00000611980 203 ntBASIC7.23□□□□□ -1.25
CD44P16070 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CD44P16070 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.23□□□□□ -1.25
CD44P16070 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 AC027228.2-201ENST00000567141 2154 ntBASIC7.23□□□□□ -1.25
CD44P16070 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CD44P16070 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CD44P16070 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.22□□□□□ -1.25
CD44P16070 AC011933.2-201ENST00000578539 2790 ntBASIC7.22□□□□□ -1.25
CD44P16070 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
CD44P16070 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 RNU1-130P-201ENST00000363930 160 ntBASIC7.22□□□□□ -1.25
CD44P16070 MIR488-201ENST00000365739 83 ntBASIC7.22□□□□□ -1.25
CD44P16070 RNU6-225P-201ENST00000384613 103 ntBASIC7.22□□□□□ -1.25
CD44P16070 RNU6-1248P-201ENST00000391096 64 ntBASIC7.22□□□□□ -1.25
CD44P16070 AL359092.1-201ENST00000417156 265 ntBASIC7.22□□□□□ -1.25
CD44P16070 AL358472.1-201ENST00000431295 329 ntBASIC7.22□□□□□ -1.25
CD44P16070 AC083855.1-201ENST00000440041 258 ntBASIC7.22□□□□□ -1.25
CD44P16070 AC004386.2-201ENST00000441858 148 ntBASIC7.22□□□□□ -1.25
CD44P16070 SNRPBP1-201ENST00000443634 282 ntBASIC7.22□□□□□ -1.25
CD44P16070 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CD44P16070 AL590399.6-201ENST00000446396 307 ntBASIC7.22□□□□□ -1.25
CD44P16070 RPS4XP13-201ENST00000483219 789 ntBASIC7.22□□□□□ -1.25
CD44P16070 SNORA40.13-201ENST00000516379 120 ntBASIC7.22□□□□□ -1.25
CD44P16070 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.22□□□□□ -1.25
CD44P16070 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.22□□□□□ -1.25
CD44P16070 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC7.22□□□□□ -1.25
CD44P16070 RN7SL802P-201ENST00000577858 299 ntBASIC7.22□□□□□ -1.25
CD44P16070 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.22□□□□□ -1.25
CD44P16070 SNORD91B-202ENST00000608459 222 ntBASIC7.22□□□□□ -1.25
CD44P16070 AC024255.1-201ENST00000614376 102 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms