Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CFTRP13569 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.42□□□□□ -1.86
CFTRP13569 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CFTRP13569 AC019129.1-201ENST00000403786 261 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AP1B1P2-201ENST00000416196 106 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.41□□□□□ -1.86
CFTRP13569 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.41□□□□□ -1.86
CFTRP13569 AL445669.2-201ENST00000454425 421 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.41□□□□□ -1.86
CFTRP13569 MIR6715B-201ENST00000637172 77 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RLIMP2-201ENST00000427891 1563 ntBASIC3.41□□□□□ -1.86
CFTRP13569 MIR6073-201ENST00000352083 89 ntBASIC3.41□□□□□ -1.86
CFTRP13569 Y_RNA.118-201ENST00000363300 101 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-1320P-201ENST00000390838 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-1269P-201ENST00000391139 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 SNORA40.18-201ENST00000391200 128 ntBASIC3.41□□□□□ -1.86
CFTRP13569 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.41□□□□□ -1.86
CFTRP13569 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-599P-201ENST00000459383 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-1193P-201ENST00000459461 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RPS29P11-201ENST00000496507 171 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC108078.2-201ENST00000510750 236 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.41□□□□□ -1.86
CFTRP13569 MTCO3P13-201ENST00000577757 781 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.41□□□□□ -1.86
CFTRP13569 VN1R79P-201ENST00000593540 513 ntBASIC3.41□□□□□ -1.86
CFTRP13569 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.41□□□□□ -1.86
CFTRP13569 AL356280.1-201ENST00000603614 379 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-368P-201ENST00000620928 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 RNU6-538P-201ENST00000622329 107 ntBASIC3.41□□□□□ -1.86
CFTRP13569 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CFTRP13569 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CFTRP13569 RN7SKP44-201ENST00000363602 316 ntBASIC3.4□□□□□ -1.87
CFTRP13569 DEFA7P-201ENST00000382676 285 ntBASIC3.4□□□□□ -1.87
CFTRP13569 NCSTNP1-201ENST00000406229 144 ntBASIC3.4□□□□□ -1.87
CFTRP13569 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.4□□□□□ -1.87
CFTRP13569 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.4□□□□□ -1.87
CFTRP13569 AL591719.1-201ENST00000444669 744 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AP000852.1-201ENST00000472460 573 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AP000889.2-201ENST00000532684 490 ntBASIC3.4□□□□□ -1.87
CFTRP13569 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.4□□□□□ -1.87
CFTRP13569 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.4□□□□□ -1.87
CFTRP13569 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.4□□□□□ -1.87
CFTRP13569 CD24P2-201ENST00000565486 219 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.6-201ENST00000603753 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.11-201ENST00000604059 253 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.10-201ENST00000604330 253 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AC008162.1-201ENST00000604718 254 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.1-201ENST00000604752 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.2-201ENST00000604983 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.5-201ENST00000605253 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.4-201ENST00000605279 254 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.12-201ENST00000605291 253 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.8-201ENST00000605353 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.9-201ENST00000605428 253 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AL670379.7-201ENST00000605823 252 ntBASIC3.4□□□□□ -1.87
CFTRP13569 AC091046.2-201ENST00000620775 665 ntBASIC3.4□□□□□ -1.87
CFTRP13569 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CFTRP13569 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CFTRP13569 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CFTRP13569 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFTRP13569 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
CFTRP13569 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CFTRP13569 AL627390.1-201ENST00000396055 340 ntBASIC3.39□□□□□ -1.87
CFTRP13569 RNU4-62P-201ENST00000410125 130 ntBASIC3.39□□□□□ -1.87
CFTRP13569 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.39□□□□□ -1.87
CFTRP13569 RNU7-157P-201ENST00000459600 66 ntBASIC3.39□□□□□ -1.87
CFTRP13569 MIR499A-201ENST00000384903 122 ntBASIC3.38□□□□□ -1.87
CFTRP13569 AC009302.1-201ENST00000417147 390 ntBASIC3.38□□□□□ -1.87
CFTRP13569 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.38□□□□□ -1.87
CFTRP13569 USP9YP8-201ENST00000441913 500 ntBASIC3.38□□□□□ -1.87
CFTRP13569 MTND4LP12-201ENST00000448237 295 ntBASIC3.38□□□□□ -1.87
CFTRP13569 RPL23AP63-201ENST00000498752 471 ntBASIC3.38□□□□□ -1.87
CFTRP13569 NAMPTP2-201ENST00000505629 1115 ntBASIC3.38□□□□□ -1.87
CFTRP13569 VTA1P2-201ENST00000520205 911 ntBASIC3.38□□□□□ -1.87
CFTRP13569 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
CFTRP13569 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CFTRP13569 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
CFTRP13569 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CFTRP13569 AC009414.1-201ENST00000427200 443 ntBASIC3.37□□□□□ -1.87
CFTRP13569 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.37□□□□□ -1.87
CFTRP13569 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.37□□□□□ -1.87
CFTRP13569 AC007182.2-201ENST00000489251 402 ntBASIC3.37□□□□□ -1.87
CFTRP13569 AC005840.1-201ENST00000498412 377 ntBASIC3.37□□□□□ -1.87
CFTRP13569 AC090819.1-201ENST00000523800 1111 ntBASIC3.37□□□□□ -1.87
CFTRP13569 MIR5089-201ENST00000580047 84 ntBASIC3.37□□□□□ -1.87
CFTRP13569 AC073387.2-201ENST00000604797 784 ntBASIC3.37□□□□□ -1.87
CFTRP13569 AC066616.2-201ENST00000559334 1481 ntBASIC3.37□□□□□ -1.87
CFTRP13569 XKRY2-202ENST00000623874 1581 ntBASIC3.37□□□□□ -1.87
CFTRP13569 XKRY-202ENST00000624960 1581 ntBASIC3.37□□□□□ -1.87
CFTRP13569 EXOC5P1-201ENST00000510543 1969 ntBASIC3.36□□□□□ -1.87
CFTRP13569 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CFTRP13569 FGF7P8-201ENST00000402994 292 ntBASIC3.36□□□□□ -1.87
CFTRP13569 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.36□□□□□ -1.87
CFTRP13569 AC067852.7-201ENST00000623270 535 ntBASIC3.36□□□□□ -1.87
CFTRP13569 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
CFTRP13569 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CFTRP13569 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
CFTRP13569 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms