Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC233279.1-201ENST00000455300 423 ntBASIC3.43□□□□□ -1.86
TOP2AP11388 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.43□□□□□ -1.86
TOP2AP11388 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TOP2AP11388 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.43□□□□□ -1.86
TOP2AP11388 SNRPGP19-201ENST00000603826 189 ntBASIC3.43□□□□□ -1.86
TOP2AP11388 AP000787.2-201ENST00000604432 568 ntBASIC3.43□□□□□ -1.86
TOP2AP11388 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.43□□□□□ -1.86
TOP2AP11388 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TOP2AP11388 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
TOP2AP11388 RNU6-457P-201ENST00000363999 107 ntBASIC3.42□□□□□ -1.86
TOP2AP11388 U3.37-201ENST00000408528 213 ntBASIC3.42□□□□□ -1.86
TOP2AP11388 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.42□□□□□ -1.86
TOP2AP11388 RPS26P30-201ENST00000443431 335 ntBASIC3.42□□□□□ -1.86
TOP2AP11388 AP000926.1-201ENST00000479573 241 ntBASIC3.42□□□□□ -1.86
TOP2AP11388 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.42□□□□□ -1.86
TOP2AP11388 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOP2AP11388 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TOP2AP11388 Y_RNA.226-201ENST00000364337 114 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.41□□□□□ -1.86
TOP2AP11388 RNU6-321P-201ENST00000410912 106 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 RPL34P26-201ENST00000445636 354 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.41□□□□□ -1.86
TOP2AP11388 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.41□□□□□ -1.86
TOP2AP11388 AC244517.1-201ENST00000606030 2086 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 MIR7111-201ENST00000619751 72 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.41□□□□□ -1.86
TOP2AP11388 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TOP2AP11388 WWP1P1-201ENST00000466609 2769 ntBASIC3.4□□□□□ -1.86
TOP2AP11388 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.4□□□□□ -1.86
TOP2AP11388 RNU6-826P-201ENST00000516827 104 ntBASIC3.4□□□□□ -1.86
TOP2AP11388 MIR5089-201ENST00000580047 84 ntBASIC3.4□□□□□ -1.86
TOP2AP11388 AP002967.1-201ENST00000624203 539 ntBASIC3.4□□□□□ -1.86
TOP2AP11388 AL627390.1-201ENST00000396055 340 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.39□□□□□ -1.87
TOP2AP11388 HMGB3P15-201ENST00000507326 574 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP2AP11388 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP2AP11388 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.39□□□□□ -1.87
TOP2AP11388 AC084768.2-201ENST00000622736 221 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP2AP11388 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 U8.10-201ENST00000384260 133 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP2AP11388 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 AL445685.2-201ENST00000422551 342 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.39□□□□□ -1.87
TOP2AP11388 RPL39P40-201ENST00000445481 146 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP2AP11388 MTAPP1-201ENST00000489154 819 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 GZMAP1-201ENST00000503054 631 ntBASIC3.39□□□□□ -1.87
TOP2AP11388 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.39□□□□□ -1.87
TOP2AP11388 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.39□□□□□ -1.87
TOP2AP11388 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOP2AP11388 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
TOP2AP11388 RPL23AP36-201ENST00000413895 458 ntBASIC3.38□□□□□ -1.87
TOP2AP11388 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.38□□□□□ -1.87
TOP2AP11388 RPL23AP63-201ENST00000498752 471 ntBASIC3.38□□□□□ -1.87
TOP2AP11388 TRAV31-201ENST00000502780 342 ntBASIC3.38□□□□□ -1.87
TOP2AP11388 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.38□□□□□ -1.87
TOP2AP11388 AL356575.1-201ENST00000603008 283 ntBASIC3.38□□□□□ -1.87
TOP2AP11388 AP004372.1-201ENST00000604842 844 ntBASIC3.38□□□□□ -1.87
TOP2AP11388 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.38□□□□□ -1.87
TOP2AP11388 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
TOP2AP11388 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOP2AP11388 RNA5SP190-201ENST00000365222 118 ntBASIC3.37□□□□□ -1.87
TOP2AP11388 TTC39CP1-201ENST00000512513 755 ntBASIC3.37□□□□□ -1.87
TOP2AP11388 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.37□□□□□ -1.87
TOP2AP11388 snoZ278.1-201ENST00000517059 112 ntBASIC3.37□□□□□ -1.87
TOP2AP11388 AL606537.1-201ENST00000607258 2011 ntBASIC3.37□□□□□ -1.87
TOP2AP11388 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TOP2AP11388 RNU6-661P-201ENST00000362409 107 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 Y_RNA.164-201ENST00000363709 102 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 SNORA40.18-201ENST00000391200 128 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 AC007390.1-201ENST00000415722 356 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.36□□□□□ -1.87
TOP2AP11388 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP2AP11388 AC104435.1-201ENST00000483483 166 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.36□□□□□ -1.87
TOP2AP11388 AC108729.3-201ENST00000513484 108 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP2AP11388 AC023043.2-201ENST00000589678 1026 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 VN1R80P-201ENST00000597126 338 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
TOP2AP11388 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP2AP11388 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TOP2AP11388 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP2AP11388 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOP2AP11388 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOP2AP11388 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TOP2AP11388 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 AF274854.1-201ENST00000413236 615 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 AC008571.1-201ENST00000467232 300 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.35□□□□□ -1.87
TOP2AP11388 RN7SKP31-201ENST00000516354 278 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.35□□□□□ -1.87
TOP2AP11388 AC068790.3-201ENST00000602988 553 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 PSMA6P4-201ENST00000603247 718 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 ABI1P1-201ENST00000603375 1120 ntBASIC3.35□□□□□ -1.87
TOP2AP11388 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOP2AP11388 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms