Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL121839.2-201ENST00000565058 6943 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC125336.1-201ENST00000508893 2827 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AL450345.1-202ENST00000605741 3881 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 Y_RNA.197-201ENST00000364004 102 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNY1P12-201ENST00000364251 105 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNA5SP479-201ENST00000364858 117 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 SNORA70.6-201ENST00000383934 134 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-178P-201ENST00000384631 104 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 MIR548F4-201ENST00000408515 105 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNU2-15P-201ENST00000410692 191 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RPS15AP12-201ENST00000419498 388 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC007283.2-201ENST00000424739 197 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RPS3AP52-201ENST00000435639 297 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 SUMO1P3-201ENST00000439961 304 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC002553.2-201ENST00000453217 340 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RNU7-152P-201ENST00000458982 64 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC083829.1-201ENST00000503756 657 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC022634.1-201ENST00000520765 532 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 MIR7853-201ENST00000584820 132 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC068790.3-201ENST00000602988 553 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AL049794.2-201ENST00000616301 365 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AP001005.3-201ENST00000622049 129 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 OR52H1-202ENST00000641796 1061 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 SAGE4P-201ENST00000442271 3381 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC009962.1-201ENST00000567327 3813 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 AC006020.1-201ENST00000420179 1854 ntBASIC6.56□□□□□ -1.36
CSB-PGBD3P0DP91 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC011460.1-201ENST00000636268 1834 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC112198.2-201ENST00000426589 6996 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 Y_RNA.28-201ENST00000362554 111 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 RNVU1-3-201ENST00000364313 161 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 ENSAP1-201ENST00000392855 326 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AL583835.1-201ENST00000399570 407 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 TBCAP2-201ENST00000416175 326 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 RPL23AP1-201ENST00000428990 471 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 RPL23AP30-201ENST00000432419 501 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 UBE2V1P13-201ENST00000436983 439 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 CECR9-201ENST00000453421 199 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 snoU13.29-201ENST00000459370 104 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 RPS4XP10-201ENST00000465034 731 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC078785.3-201ENST00000476607 425 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC055855.1-201ENST00000489563 579 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 RN7SKP122-201ENST00000515923 296 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC022616.3-201ENST00000523940 148 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 SNRPGP18-201ENST00000553000 214 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 HMGB1P6-201ENST00000569046 646 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 MIR3146-201ENST00000580367 79 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC007938.3-201ENST00000604965 623 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AP000654.2-201ENST00000605633 586 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AC092807.2-201ENST00000609367 243 ntBASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.55□□□□□ -1.36
CSB-PGBD3P0DP91 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.54□□□□□ -1.36
CSB-PGBD3P0DP91 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms