Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PABPC1P9-201ENST00000426076 1612 ntBASIC1.99□□□□□ -2.09
CXCL1P09341 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL1P09341 AC135776.4-201ENST00000624300 1904 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC016716.1-201ENST00000265882 708 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CXCL1P09341 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CXCL1P09341 RNU6-1249P-201ENST00000363237 111 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 RNA5SP267-201ENST00000364893 126 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 RNU1-51P-201ENST00000365345 176 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 RNU6-761P-201ENST00000384148 107 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 SNORA51.11-201ENST00000384442 131 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 RPS4XP7-201ENST00000406274 780 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 AL158156.1-201ENST00000422509 473 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 AC096632.1-201ENST00000427395 310 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC091390.1-201ENST00000433904 331 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL1P09341 AC008280.2-201ENST00000455473 307 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.98□□□□□ -2.09
CXCL1P09341 RAC1P5-201ENST00000512182 576 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 OR10V3P-201ENST00000525712 725 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 C1DP5-201ENST00000525775 383 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 OR4R1P-201ENST00000529879 463 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 HIGD1AP5-201ENST00000529959 259 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 SNRPGP16-201ENST00000533275 226 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC018630.1-201ENST00000541376 925 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CXCL1P09341 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL1P09341 EIF5A2P1-201ENST00000564027 460 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.98□□□□□ -2.09
CXCL1P09341 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.98□□□□□ -2.09
CXCL1P09341 ELOCP35-201ENST00000604289 336 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AL161734.1-201ENST00000609720 557 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AL136295.6-201ENST00000610486 658 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC034102.8-201ENST00000615146 484 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC034229.5-201ENST00000624258 185 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
CXCL1P09341 TAB3P1-202ENST00000452645 1634 ntBASIC1.98□□□□□ -2.09
CXCL1P09341 AC244517.1-201ENST00000606030 2086 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CXCL1P09341 RNU6-989P-201ENST00000362756 107 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CXCL1P09341 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CXCL1P09341 RNU6-1226P-201ENST00000384317 107 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AL162578.1-201ENST00000406202 378 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL1P09341 AC016769.2-201ENST00000414815 475 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL1P09341 RPL7P30-201ENST00000420888 709 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CXCL1P09341 AC023424.2-201ENST00000493479 777 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.97□□□□□ -2.09
CXCL1P09341 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL1P09341 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 AC009812.2-201ENST00000517657 457 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.97□□□□□ -2.09
CXCL1P09341 NOP56P3-201ENST00000549457 385 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AC008739.2-201ENST00000597006 317 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 SUMO2P14-201ENST00000604488 293 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 MIR6895-201ENST00000613497 78 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 AC140725.3-201ENST00000616193 880 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 Z82209.1-201ENST00000422141 2135 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CXCL1P09341 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.97□□□□□ -2.09
CXCL1P09341 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CXCL1P09341 AC046144.1-201ENST00000478559 1853 ntBASIC1.97□□□□□ -2.09
CXCL1P09341 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
CXCL1P09341 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 RNU5D-1-201ENST00000363299 116 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 RNA5SP21-201ENST00000410917 96 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC099677.1-201ENST00000420575 175 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 FNDC3CP-201ENST00000420795 1155 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC022018.1-201ENST00000430685 241 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 PRDX3P3-201ENST00000447765 522 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC233982.1-201ENST00000451247 436 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms