Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC244205.2-202ENST00000635781 342 ntBASIC3.61□□□□□ -1.83
VTNP04004 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.61□□□□□ -1.83
VTNP04004 AL353743.1-202ENST00000431724 1695 ntBASIC3.61□□□□□ -1.83
VTNP04004 MTND5P3-201ENST00000438536 1800 ntBASIC3.6□□□□□ -1.83
VTNP04004 CDR1-202ENST00000625883 1485 ntBASIC3.6□□□□□ -1.83
VTNP04004 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VTNP04004 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VTNP04004 MTCO1P14-201ENST00000441695 1559 ntBASIC3.6□□□□□ -1.83
VTNP04004 MTCO1P24-201ENST00000515438 1558 ntBASIC3.6□□□□□ -1.83
VTNP04004 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VTNP04004 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
VTNP04004 GNG5P1-201ENST00000255500 204 ntBASIC3.6□□□□□ -1.83
VTNP04004 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
VTNP04004 RNU6-251P-201ENST00000363235 104 ntBASIC3.6□□□□□ -1.83
VTNP04004 Y_RNA.169-201ENST00000363745 96 ntBASIC3.6□□□□□ -1.83
VTNP04004 SNRPEP2-201ENST00000397592 279 ntBASIC3.6□□□□□ -1.83
VTNP04004 RNA5SP239-201ENST00000410218 129 ntBASIC3.6□□□□□ -1.83
VTNP04004 RAP1BP1-201ENST00000412709 553 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.6□□□□□ -1.83
VTNP04004 AC093698.1-201ENST00000423843 571 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
VTNP04004 RPL31P54-201ENST00000429803 370 ntBASIC3.6□□□□□ -1.83
VTNP04004 CKS1BP5-201ENST00000434172 273 ntBASIC3.6□□□□□ -1.83
VTNP04004 AL354941.1-201ENST00000438600 464 ntBASIC3.6□□□□□ -1.83
VTNP04004 OR6K5P-201ENST00000447050 945 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.6□□□□□ -1.83
VTNP04004 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
VTNP04004 RPL7P23-201ENST00000493874 747 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 AC104090.1-201ENST00000506341 1171 ntBASIC3.6□□□□□ -1.83
VTNP04004 HMGB1P28-201ENST00000507778 552 ntBASIC3.6□□□□□ -1.83
VTNP04004 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.6□□□□□ -1.83
VTNP04004 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.6□□□□□ -1.83
VTNP04004 AC119751.5-201ENST00000514077 770 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.6□□□□□ -1.83
VTNP04004 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.6□□□□□ -1.83
VTNP04004 AC027309.2-201ENST00000520566 192 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 AP000790.1-201ENST00000528891 737 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.6□□□□□ -1.83
VTNP04004 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.6□□□□□ -1.83
VTNP04004 AC006270.3-201ENST00000605967 1036 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.6□□□□□ -1.83
VTNP04004 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
VTNP04004 AL607023.1-201ENST00000620045 248 ntBASIC3.6□□□□□ -1.83
VTNP04004 AC078883.4-201ENST00000623218 367 ntBASIC3.6□□□□□ -1.83
VTNP04004 AP000676.3-201ENST00000623299 569 ntBASIC3.6□□□□□ -1.83
VTNP04004 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VTNP04004 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VTNP04004 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
VTNP04004 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VTNP04004 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VTNP04004 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTNP04004 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VTNP04004 RNU6-1226P-201ENST00000384317 107 ntBASIC3.59□□□□□ -1.83
VTNP04004 MIR649-201ENST00000384843 97 ntBASIC3.59□□□□□ -1.83
VTNP04004 RNU4-47P-201ENST00000410876 114 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC096664.2-201ENST00000411843 406 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC068533.2-201ENST00000411872 306 ntBASIC3.59□□□□□ -1.83
VTNP04004 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 RPL31P2-201ENST00000413849 377 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 AC092832.1-201ENST00000422934 400 ntBASIC3.59□□□□□ -1.83
VTNP04004 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC234781.2-201ENST00000426370 994 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC096632.1-201ENST00000427395 310 ntBASIC3.59□□□□□ -1.83
VTNP04004 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 AL590399.6-201ENST00000446396 307 ntBASIC3.59□□□□□ -1.83
VTNP04004 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 AL109741.2-201ENST00000455561 343 ntBASIC3.59□□□□□ -1.83
VTNP04004 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.59□□□□□ -1.83
VTNP04004 AC109925.1-201ENST00000478069 331 ntBASIC3.59□□□□□ -1.83
VTNP04004 RPS3AP22-201ENST00000488297 769 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC006445.1-201ENST00000491925 405 ntBASIC3.59□□□□□ -1.83
VTNP04004 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.59□□□□□ -1.83
VTNP04004 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 RNF138P1-201ENST00000502765 546 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC093281.2-201ENST00000510153 597 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VTNP04004 AC104057.1-201ENST00000515547 497 ntBASIC3.59□□□□□ -1.83
VTNP04004 RNY4P37-201ENST00000516225 96 ntBASIC3.59□□□□□ -1.83
VTNP04004 Vault.1-201ENST00000516474 102 ntBASIC3.59□□□□□ -1.83
VTNP04004 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.59□□□□□ -1.83
VTNP04004 ARL2BPP5-201ENST00000523141 481 ntBASIC3.59□□□□□ -1.83
VTNP04004 AP001636.2-201ENST00000525517 696 ntBASIC3.59□□□□□ -1.83
VTNP04004 OR6C73P-201ENST00000546432 358 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms