Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 U3.29-201ENST00000391296 212 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 ATP5F1P3-201ENST00000397213 657 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 DUTP6-201ENST00000425573 462 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 RPL23AP82-202ENST00000427528 469 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AL008629.1-201ENST00000438615 184 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 MTND2P19-201ENST00000449129 1012 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.26□□□□□ -1.89
MT-ND1P03886 RPS27AP1-201ENST00000475545 471 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 RPL7P18-201ENST00000478965 734 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.26□□□□□ -1.89
MT-ND1P03886 HMGB1P28-201ENST00000507778 552 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC010587.2-201ENST00000511727 448 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC026402.1-201ENST00000513642 170 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.26□□□□□ -1.89
MT-ND1P03886 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 SNORA70.18-201ENST00000516696 98 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC007991.1-201ENST00000522680 631 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC018630.1-201ENST00000541376 925 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.26□□□□□ -1.89
MT-ND1P03886 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.26□□□□□ -1.89
MT-ND1P03886 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.26□□□□□ -1.89
MT-ND1P03886 MIR5685-201ENST00000579080 79 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC022916.3-201ENST00000592961 742 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC069304.2-201ENST00000605154 435 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC011816.2-201ENST00000607089 556 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC092653.1-201ENST00000608509 531 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC091304.6-201ENST00000619761 202 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.26□□□□□ -1.89
MT-ND1P03886 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC119674.1-207ENST00000641355 633 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 AC104454.1-201ENST00000421341 1401 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MT-ND1P03886 AP000526.1-201ENST00000603308 1388 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MT-ND1P03886 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MT-ND1P03886 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MT-ND1P03886 Y_RNA.25-201ENST00000362528 102 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC011233.1-201ENST00000422812 283 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 NEK4P1-201ENST00000433383 879 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AL049830.2-201ENST00000480072 201 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC105914.1-201ENST00000511798 226 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC119751.5-201ENST00000514077 770 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 RNU6-1129P-201ENST00000515964 104 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 SNORA3.4-201ENST00000515969 96 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 RANP9-201ENST00000519957 271 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 HSPE1P5-201ENST00000561489 272 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 LARP7P2-201ENST00000575306 125 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AC067852.3-201ENST00000589177 561 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.25□□□□□ -1.89
MT-ND1P03886 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.25□□□□□ -1.89
MT-ND1P03886 AP000676.3-201ENST00000623299 569 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AC007490.1-201ENST00000624321 703 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 CYP3A51P-201ENST00000633513 256 ntBASIC3.25□□□□□ -1.89
MT-ND1P03886 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MT-ND1P03886 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms