Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.6□□□□□ -1.83
COL2A1P02458 AL096803.2-201ENST00000450032 677 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 BZW1P2-201ENST00000473537 826 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC112184.1-201ENST00000505179 312 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 RN7SKP34-201ENST00000516142 244 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC103783.1-201ENST00000520506 373 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC090281.1-201ENST00000523019 276 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 RFPL1S-203ENST00000539579 330 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC011602.1-201ENST00000546484 331 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 MIR3915-201ENST00000578518 97 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC067852.4-201ENST00000590314 478 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 RSL24D1P11-201ENST00000591045 491 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.6□□□□□ -1.83
COL2A1P02458 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 VN1R7P-201ENST00000619242 903 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.6□□□□□ -1.83
COL2A1P02458 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC005832.2-201ENST00000538921 1430 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 RNU6-1215P-201ENST00000384441 102 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 RN7SKP247-201ENST00000411094 308 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 EEF1A1P41-201ENST00000414667 207 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 BTF3P9-201ENST00000418784 283 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC006366.1-201ENST00000422002 759 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 NUP35P1-201ENST00000422734 947 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 RPS12P5-201ENST00000423449 371 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 MTCYBP5-201ENST00000423752 1135 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 C1DP1-201ENST00000426049 402 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 MTCO1P52-201ENST00000433928 531 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC098826.1-201ENST00000433943 471 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.6□□□□□ -1.83
COL2A1P02458 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 MTATP6P23-201ENST00000440153 476 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AL031667.1-201ENST00000440222 725 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 SLC31A1P1-201ENST00000451221 567 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 MTCO2P18-201ENST00000457151 658 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 MTND2P14-201ENST00000482139 351 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC009812.2-201ENST00000517657 457 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.6□□□□□ -1.83
COL2A1P02458 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC023050.2-201ENST00000544968 387 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC091544.4-201ENST00000555268 342 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC124283.4-201ENST00000581815 456 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 RPL23AP92-201ENST00000603609 255 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AL392112.1-201ENST00000605115 829 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC006270.3-201ENST00000605967 1036 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AP001596.2-201ENST00000608410 312 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC068944.2-201ENST00000610373 403 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AC122133.1-201ENST00000613964 233 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC018755.4-201ENST00000619715 454 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.6□□□□□ -1.83
COL2A1P02458 AC010149.2-201ENST00000637608 315 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL2A1P02458 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL2A1P02458 MTND5P29-201ENST00000458676 1807 ntBASIC3.59□□□□□ -1.83
COL2A1P02458 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
COL2A1P02458 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.59□□□□□ -1.83
COL2A1P02458 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL2A1P02458 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL2A1P02458 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL2A1P02458 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.59□□□□□ -1.84
COL2A1P02458 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL2A1P02458 Y_RNA.77-201ENST00000362962 107 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 RNU6-694P-201ENST00000364071 147 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.59□□□□□ -1.84
COL2A1P02458 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.59□□□□□ -1.84
COL2A1P02458 RPL7P27-201ENST00000403775 720 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 RAP1BP3-201ENST00000407180 549 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AL161449.1-201ENST00000414531 1199 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.84
COL2A1P02458 MTND4P20-201ENST00000424125 869 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 Z93242.1-201ENST00000427102 353 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.59□□□□□ -1.84
COL2A1P02458 AL135938.1-201ENST00000443141 297 ntBASIC3.59□□□□□ -1.84
COL2A1P02458 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.59□□□□□ -1.84
COL2A1P02458 HMGN1P18-201ENST00000457642 277 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms