Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP3BO95985 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP3BO95985 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP3BO95985 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP3BO95985 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TOP3BO95985 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP3BO95985 XPOTP1-201ENST00000443317 2398 ntBASIC4.26□□□□□ -1.73
TOP3BO95985 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 Y_RNA.11-201ENST00000362375 109 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 MIR506-201ENST00000384998 124 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TOP3BO95985 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 RNU2-28P-201ENST00000410457 189 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 RNU6-248P-201ENST00000410720 107 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.25□□□□□ -1.73
TOP3BO95985 MTATP6P27-201ENST00000416987 621 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 USP12PX-201ENST00000432383 1057 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AL831737.1-201ENST00000441288 271 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 RPL7P36-201ENST00000444633 681 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 NFU1P2-201ENST00000448700 469 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 PDSS1P2-201ENST00000449397 678 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AL162388.1-201ENST00000450912 352 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 SLC31A1P1-201ENST00000451221 567 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 RPL18AP17-201ENST00000455326 198 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 RN7SL691P-201ENST00000494487 301 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC110768.1-201ENST00000509222 400 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC091133.4-201ENST00000511142 308 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AP002748.2-201ENST00000528671 348 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC090502.2-201ENST00000549267 280 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 HSPE1P5-201ENST00000561489 272 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC006504.3-201ENST00000586818 523 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.25□□□□□ -1.73
TOP3BO95985 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.25□□□□□ -1.73
TOP3BO95985 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 AL596327.1-201ENST00000603629 213 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC112230.1-201ENST00000604342 547 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC069304.2-201ENST00000605154 435 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AP003117.2-201ENST00000606010 545 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC096577.2-201ENST00000611455 153 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC107081.3-201ENST00000612715 2034 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AL121772.2-201ENST00000614331 297 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 AC006338.1-201ENST00000618453 749 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 FAM157B-203ENST00000639350 358 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 ZNF37BP-203ENST00000452306 1352 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 MTND4P16-201ENST00000466108 1367 ntBASIC4.25□□□□□ -1.73
TOP3BO95985 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TOP3BO95985 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
TOP3BO95985 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TOP3BO95985 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.24□□□□□ -1.73
TOP3BO95985 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP3BO95985 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TOP3BO95985 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOP3BO95985 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TOP3BO95985 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP3BO95985 RNA5SP119-201ENST00000362715 117 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 MIR3065-201ENST00000390137 79 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 MIR708-201ENST00000390708 88 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 SNORA40.3-201ENST00000390964 122 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TOP3BO95985 FGF7P8-201ENST00000402994 292 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 AL450338.1-201ENST00000407987 512 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 MTCO1P17-201ENST00000411522 491 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 RAB9AP3-201ENST00000412737 573 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 HMGB3P23-201ENST00000414981 585 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 AL161631.1-201ENST00000417933 486 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 AIMP1P1-201ENST00000418670 937 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 AC004552.1-201ENST00000419089 348 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 MTCYBP24-201ENST00000420387 1106 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP3BO95985 AC233728.2-201ENST00000425348 757 ntBASIC4.24□□□□□ -1.73
TOP3BO95985 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP3BO95985 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.24□□□□□ -1.73
TOP3BO95985 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms