Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DUXAP3-201ENST00000603616 594 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 AC009974.1-201ENST00000608881 455 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 AC006023.2-201ENST00000609916 167 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 AL592295.2-201ENST00000612578 206 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 AC025588.4-201ENST00000615802 908 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 MIR7112-201ENST00000616126 65 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.86□□□□□ -1.79
GGPS1O95749 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GGPS1O95749 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GGPS1O95749 PWAR6-201ENST00000552334 4618 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
GGPS1O95749 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
GGPS1O95749 SNORA72.3-201ENST00000365074 132 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GGPS1O95749 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 HMGB1P17-201ENST00000403495 628 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 RNU2-71P-201ENST00000411395 189 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 TIMM9P2-201ENST00000419324 266 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 MTND4P6-201ENST00000438297 472 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.85□□□□□ -1.79
GGPS1O95749 RPL12P26-201ENST00000452430 487 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 AL024509.2-201ENST00000493462 493 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC109445.1-201ENST00000512356 383 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 RNY4P37-201ENST00000516225 96 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 MTND2P32-201ENST00000521584 1038 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC018630.1-201ENST00000541376 925 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 DUXAP6-201ENST00000553858 601 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC022662.1-201ENST00000580252 331 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 ZNF415P1-201ENST00000582279 1166 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC067852.3-201ENST00000589177 561 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC012669.1-201ENST00000603209 283 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC103710.3-201ENST00000608157 948 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.85□□□□□ -1.79
GGPS1O95749 AC004009.2-201ENST00000623016 728 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 AL078595.3-201ENST00000623815 1166 ntBASIC3.85□□□□□ -1.79
GGPS1O95749 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GGPS1O95749 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
GGPS1O95749 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GGPS1O95749 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.85□□□□□ -1.79
GGPS1O95749 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GGPS1O95749 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
GGPS1O95749 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
GGPS1O95749 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GGPS1O95749 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GGPS1O95749 RNA5SP197-201ENST00000363357 119 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 SNORA38.1-201ENST00000364172 131 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 Y_RNA.311-201ENST00000365068 96 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 U3.19-201ENST00000390893 196 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AL136116.1-201ENST00000403591 381 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.84□□□□□ -1.79
GGPS1O95749 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 ATP5F1P1-201ENST00000433775 569 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 MTND4LP10-201ENST00000435146 291 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 CYCSP32-201ENST00000440548 321 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC115115.1-201ENST00000449927 248 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC004801.2-202ENST00000463559 283 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 MTND1P16-201ENST00000465177 898 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC006499.2-201ENST00000513470 337 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 RNU6-415P-201ENST00000516252 97 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 RNU6-1231P-201ENST00000517185 103 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC026333.2-201ENST00000542164 106 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.84□□□□□ -1.79
GGPS1O95749 UBE2NP1-201ENST00000545592 458 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GGPS1O95749 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 MIR4276-201ENST00000584832 70 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC006557.5-201ENST00000603126 811 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.84□□□□□ -1.79
GGPS1O95749 AC009220.3-201ENST00000604318 586 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 AC131235.4-201ENST00000609288 620 ntBASIC3.84□□□□□ -1.79
GGPS1O95749 RMST_8.1-201ENST00000610287 165 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms