Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 Z99129.1-201ENST00000612510 255 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC073968.1-201ENST00000618594 637 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAPGEF3O95398 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RAPGEF3O95398 AC011978.2-201ENST00000569835 2054 ntBASIC5.57□□□□□ -1.52
RAPGEF3O95398 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAPGEF3O95398 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAPGEF3O95398 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 Y_RNA.3-201ENST00000362331 103 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 RNU5F-6P-201ENST00000362979 116 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 RNA5SP391-201ENST00000363456 119 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 RNU6-1293P-201ENST00000384077 107 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 RNU6-1215P-201ENST00000384441 102 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 MIR195-201ENST00000385194 87 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 SNORD17-201ENST00000390930 237 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 BX323014.1-201ENST00000412876 237 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 AL031584.1-201ENST00000447169 754 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC026410.2-201ENST00000460281 156 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 SRRM1P2-201ENST00000464531 1192 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC087879.1-201ENST00000474343 374 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC011825.1-201ENST00000484967 388 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 FAM172BP-201ENST00000487497 1089 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 RPL7P24-201ENST00000493052 752 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC107401.1-201ENST00000503426 685 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 PRELID3BP7-201ENST00000503606 469 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 POU5F1P7-201ENST00000508759 541 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 HSPA8P13-201ENST00000523715 472 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC124068.1-201ENST00000563131 678 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 MIR4716-201ENST00000579628 84 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC107304.1-201ENST00000604229 296 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 RNU6-156P-201ENST00000621869 107 ntBASIC5.56□□□□□ -1.52
RAPGEF3O95398 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAPGEF3O95398 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.56□□□□□ -1.52
RAPGEF3O95398 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 RNU6-301P-201ENST00000384277 107 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AL121972.1-201ENST00000402023 252 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 RPL7P30-201ENST00000420888 709 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 RPL37P21-201ENST00000435890 276 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC108941.1-201ENST00000502853 530 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC109464.2-201ENST00000510242 943 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 FABP5P5-201ENST00000515537 406 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AC025881.1-201ENST00000518851 512 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AL451007.1-201ENST00000595491 289 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 AL713922.2-201ENST00000619384 716 ntBASIC5.55□□□□□ -1.52
RAPGEF3O95398 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAPGEF3O95398 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAPGEF3O95398 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC011155.1-201ENST00000316512 456 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAPGEF3O95398 Y_RNA.6-201ENST00000362350 114 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 SNORA51.6-201ENST00000384151 125 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 ZNF603P-201ENST00000405613 487 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 RN7SKP266-201ENST00000410232 287 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC109780.2-201ENST00000413467 845 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 OR1AA1P-201ENST00000419597 916 ntBASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.54□□□□□ -1.52
RAPGEF3O95398 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms