Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AP000857.1-201ENST00000532151 543 ntBASIC2.82□□□□□ -1.96
VAPBO95292 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.82□□□□□ -1.96
VAPBO95292 MIR5195-201ENST00000583555 115 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AL442067.2-201ENST00000614033 363 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AC231759.1-201ENST00000616455 597 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.82□□□□□ -1.96
VAPBO95292 MIR6076-201ENST00000617521 113 ntBASIC2.82□□□□□ -1.96
VAPBO95292 AP003122.6-201ENST00000623831 495 ntBASIC2.82□□□□□ -1.96
VAPBO95292 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.82□□□□□ -1.96
VAPBO95292 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.82□□□□□ -1.96
VAPBO95292 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
VAPBO95292 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.82□□□□□ -1.96
VAPBO95292 CUL1P1-201ENST00000509510 2425 ntBASIC2.82□□□□□ -1.96
VAPBO95292 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.81□□□□□ -1.96
VAPBO95292 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RNU6-1027P-201ENST00000383998 107 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RNU6-796P-201ENST00000391086 107 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RNA5SP38-201ENST00000410750 119 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 RPS6P14-201ENST00000425165 719 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RPL39P40-201ENST00000445481 146 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.81□□□□□ -1.96
VAPBO95292 AL590639.1-201ENST00000456484 337 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RPS20P24-201ENST00000457473 361 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RPS4XP6-201ENST00000477670 797 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC015908.1-201ENST00000478739 476 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
VAPBO95292 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.81□□□□□ -1.96
VAPBO95292 AC096751.1-202ENST00000502691 1067 ntBASIC2.81□□□□□ -1.96
VAPBO95292 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 AC010374.2-201ENST00000512933 535 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC091826.1-201ENST00000514065 313 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC018630.1-201ENST00000541376 925 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.81□□□□□ -1.96
VAPBO95292 AC010653.1-201ENST00000571108 881 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 ZNF861P-201ENST00000588126 639 ntBASIC2.81□□□□□ -1.96
VAPBO95292 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC005046.1-201ENST00000608515 625 ntBASIC2.81□□□□□ -1.96
VAPBO95292 RMST_10.1-201ENST00000616309 154 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AL163051.2-201ENST00000618976 735 ntBASIC2.81□□□□□ -1.96
VAPBO95292 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.81□□□□□ -1.96
VAPBO95292 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VAPBO95292 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
VAPBO95292 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
VAPBO95292 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
VAPBO95292 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VAPBO95292 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VAPBO95292 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VAPBO95292 OR5H2-201ENST00000355273 945 ntBASIC2.8□□□□□ -1.96
VAPBO95292 SNORA48.5-201ENST00000391143 135 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL023807.1-201ENST00000407932 359 ntBASIC2.8□□□□□ -1.96
VAPBO95292 EEF1A1P41-201ENST00000414667 207 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC099677.1-201ENST00000420575 175 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.8□□□□□ -1.96
VAPBO95292 UBE2V1P6-201ENST00000430840 422 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.8□□□□□ -1.96
VAPBO95292 AL513043.1-201ENST00000439124 535 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC112653.1-201ENST00000443851 386 ntBASIC2.8□□□□□ -1.96
VAPBO95292 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL929288.2-201ENST00000446368 407 ntBASIC2.8□□□□□ -1.96
VAPBO95292 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
VAPBO95292 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.8□□□□□ -1.96
VAPBO95292 ARL4AP2-201ENST00000507378 601 ntBASIC2.8□□□□□ -1.96
VAPBO95292 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.8□□□□□ -1.96
VAPBO95292 HMGB1P1-201ENST00000522557 636 ntBASIC2.8□□□□□ -1.96
VAPBO95292 OSBPL9P3-201ENST00000534523 595 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC022080.3-201ENST00000544433 482 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.8□□□□□ -1.96
VAPBO95292 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.8□□□□□ -1.96
VAPBO95292 DNAJC8P1-201ENST00000554535 372 ntBASIC2.8□□□□□ -1.96
VAPBO95292 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.8□□□□□ -1.96
VAPBO95292 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.8□□□□□ -1.96
VAPBO95292 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.8□□□□□ -1.96
VAPBO95292 AC024153.1-201ENST00000603103 365 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC096947.1-201ENST00000603233 470 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AL627309.6-201ENST00000606857 840 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AP004247.3-201ENST00000608682 624 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC009570.1-201ENST00000609599 745 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC106028.5-201ENST00000610332 395 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC098679.5-201ENST00000624394 571 ntBASIC2.8□□□□□ -1.96
VAPBO95292 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.8□□□□□ -1.96
VAPBO95292 AC090740.1-201ENST00000623193 2262 ntBASIC2.8□□□□□ -1.96
VAPBO95292 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VAPBO95292 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VAPBO95292 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
VAPBO95292 MIR208A-201ENST00000362287 71 ntBASIC2.79□□□□□ -1.96
VAPBO95292 RNU6-730P-201ENST00000383954 104 ntBASIC2.79□□□□□ -1.96
VAPBO95292 RPS4XP3-201ENST00000398541 413 ntBASIC2.79□□□□□ -1.96
VAPBO95292 KRR1P1-201ENST00000419430 803 ntBASIC2.79□□□□□ -1.96
VAPBO95292 ATG3P1-201ENST00000419507 911 ntBASIC2.79□□□□□ -1.96
VAPBO95292 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.79□□□□□ -1.96
VAPBO95292 AL606495.1-201ENST00000422100 813 ntBASIC2.79□□□□□ -1.96
VAPBO95292 SAR1AP4-201ENST00000429225 591 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms